RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 UBA1P22314 1058 aaKnown RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 TLE2Q04725 743 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 CELF3Q5SZQ8 465 aaKnown RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 MCTP2Q6DN12 878 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 DHX37Q8IY37 1157 aaKnown RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 FAM177A1Q8N128 213 aaPredicted RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 NECAB1Q8N987 351 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 AFG1LQ8WV93 481 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 GTF3C6Q969F1 213 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 VTI1AQ96AJ9 217 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 PGBD1Q96JS3 809 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 ANO3Q9BYT9 981 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 ZMYND8Q9ULU4 1186 aaPredicted RBP22.12■■□□□ 1.13
SS18-208ENST00000577751 UBIAD1Q9Y5Z9 338 aa22.12■■□□□ 1.13
SS18-208ENST00000577751 SCN10AQ9Y5Y9 1956 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 CEP290O15078 2479 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 MMP3P08254 477 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 ITGB5P18084 799 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 SREBF1P36956 1147 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 NLRX1Q86UT6 975 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 GPRASP2Q96D09 838 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 UPF2Q9HAU5 1272 aaKnown RBP22.11■■□□□ 1.13
SS18-208ENST00000577751 LIMCH1Q9UPQ0 1083 aa22.11■■□□□ 1.13
SS18-208ENST00000577751 GGPS1O95749 300 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 MYL3P08590 195 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 HOXD8P13378 290 aaPredicted RBP22.1■■□□□ 1.13
SS18-208ENST00000577751 SYN1P17600 705 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 ITGA7Q13683 1181 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 JAKMIP3Q5VZ66 844 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 REXO1Q8N1G1 1221 aaKnown RBP22.1■■□□□ 1.13
SS18-208ENST00000577751 PPTC7Q8NI37 304 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 BICD2Q8TD16 824 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 CRYGNQ8WXF5 182 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 AIFM3Q96NN9 605 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 SENP7Q9BQF6 1050 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 MTG1Q9BT17 334 aaPredicted RBP22.1■■□□□ 1.13
SS18-208ENST00000577751 BCAS3Q9H6U6 928 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 JADE2Q9NQC1 790 aa22.1■■□□□ 1.13
SS18-208ENST00000577751 MROH7Q68CQ1 1323 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 DOCK5Q9H7D0 1870 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 MAFGO15525 162 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 PSMC6P62333 389 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 FAAP100Q0VG06 881 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 ST3GAL1Q11201 340 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 HSDL1Q3SXM5 330 aa22.09■■□□□ 1.13
SS18-208ENST00000577751 PQBP1O60828 265 aaKnown RBP22.08■■□□□ 1.13
SS18-208ENST00000577751 FDPSP14324 419 aaKnown RBP22.08■■□□□ 1.13
SS18-208ENST00000577751 NLRP5P59047 1200 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 NEDD9Q14511 834 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 DGKDQ16760 1214 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 FAM126BQ8IXS8 530 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 CDHR1Q96JP9 859 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 MXRA8Q9BRK3 442 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 PRO3102Q9H379 93 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 MLXIPQ9HAP2 919 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 PDLIM7Q9NR12 457 aa22.08■■□□□ 1.13
SS18-208ENST00000577751 DCDC2CA8MYV0 355 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 ATP9AO75110 1047 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 PPFIA4O75335 1185 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 CYP3A4P08684 503 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 CLTBP09497 229 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 ARHGAP4P98171 946 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 MTMR1Q13613 665 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 RABEP1Q15276 862 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 NPY5RQ15761 445 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 SH3RF1Q7Z6J0 888 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 DAGLBQ8NCG7 672 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 NSUN7Q8NE18 718 aaKnown RBP22.07■■□□□ 1.12
SS18-208ENST00000577751 IL27Q8NEV9 243 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 CYP2W1Q8TAV3 490 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 SPATA33Q96N06 139 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 TBC1D32Q96NH3 1257 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 GDF15Q99988 308 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 BACH2Q9BYV9 841 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 PCDHA4Q9UN74 947 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 LTBP2Q14767 1821 aa22.07■■□□□ 1.12
SS18-208ENST00000577751 M0R2N6 131 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 DTNBO60941 627 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 CD4P01730 458 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 KCNA2P16389 499 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 GALNT17Q6IS24 598 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 GIMAP8Q8ND71 665 aaPredicted RBP22.06■■□□□ 1.12
SS18-208ENST00000577751 RASGRP4Q8TDF6 673 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 KAT2BQ92831 832 aa22.06■■□□□ 1.12
SS18-208ENST00000577751 ORC3Q9UBD5 711 aaPredicted RBP22.06■■□□□ 1.12
SS18-208ENST00000577751 TRIM43BA6NCK2 446 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 MEIS1O00470 390 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 KIAA0355O15063 1070 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 SORBS3O60504 671 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 NBPF20Q3BBV1 942 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 CEP55Q53EZ4 464 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 CYFIP1Q7L576 1253 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 NIPA1Q7RTP0 329 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 BLIDQ8IZY5 108 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 WASF1Q92558 559 aa22.05■■□□□ 1.12
SS18-208ENST00000577751 TRIM43Q96BQ3 446 aaPredicted RBP22.05■■□□□ 1.12
SS18-208ENST00000577751 ZSCAN31Q96LW9 406 aaPredicted RBP22.05■■□□□ 1.12
SS18-208ENST00000577751 PHF20Q9BVI0 1012 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms