RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ZIM3Q96PE6 472 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 FBXL5Q9UKA1 691 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CAB39Q9Y376 341 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 GOLGA8QA0A0J9YX86 632 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 POTEB3A0JP26 581 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 GOLGA8OA6NCC3 632 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 GOLGA8NF8WBI6 632 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SMAPO00193 183 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RANBP6O60518 1105 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 ECEL1O95672 775 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PYGLP06737 847 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ALOX15P16050 662 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 PMS2P54278 862 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 ARMC3Q5W041 872 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 POTEBQ6S5H4 581 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PALM2Q8IXS6 379 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ERMNQ8TAM6 284 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 FAM129AQ9BZQ8 928 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 BLZF1Q9H2G9 400 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 USP40Q9NVE5 1235 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DNAAF2Q9NVR5 837 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DDX20Q9UHI6 824 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 FBXO9Q9UK97 447 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 IGF1RP08069 1367 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RTL9Q8NET4 1388 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 GOLGA8IPA6NC78 632 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 O00370 1275 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ZCCHC18P0CG32 403 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 HMOX2P30519 316 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CXCR5P32302 372 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ZNF174Q15697 407 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RABGAP1LQ5R372 815 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ASXL1Q8IXJ9 1541 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 TRMT2AQ8IZ69 625 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CCT7Q99832 543 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 NT5C3AQ9H0P0 336 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CCDC134Q9H6E4 229 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RPAP3Q9H6T3 665 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 ATAD3AQ9NVI7 634 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ZNF180Q9UJW8 692 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CFAP69A5D8W1 941 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 G3V3G9 751 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RNF113AO15541 343 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PDE6AP16499 860 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RGS2P41220 211 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RAB27AP51159 221 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 NUP107P57740 925 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SLC39A14Q15043 492 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ARHGAP44Q17R89 818 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DCAF8Q5TAQ9 597 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 CENPUQ71F23 418 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 TMEM110Q86TL2 294 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 TERB1Q8NA31 727 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DRAXINQ8NBI3 349 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 TNIP2Q8NFZ5 429 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SLC26A7Q8TE54 656 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 LENG1Q96BZ8 264 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 ERP27Q96DN0 273 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ZKSCAN3Q9BRR0 538 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DNAJC17Q9NVM6 304 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 RABGEF1Q9UJ41 708 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SNX5Q9Y5X3 404 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 COMMD10Q9Y6G5 202 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 GTPBP6O43824 516 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 DEXIO95424 95 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 ATP1A1P05023 1023 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 PPIDQ08752 370 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 MMGT1Q8N4V1 131 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 C8orf58Q8NAV2 365 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SMCR8Q8TEV9 937 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 PRMT1Q99873 361 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 LSM14BQ9BX40 385 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 NACA2Q9H009 215 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SAMSN1Q9NSI8 373 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SAP30BPQ9UHR5 308 aaKnown RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 RAB21Q9UL25 225 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 L3MBTL1Q9Y468 752 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 MSH6P52701 1360 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 POC1B-GALNT4F8VUJ3 575 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 SEMA3EO15041 775 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 PPP6R2O75170 966 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 FMNL1O95466 1100 aaPredicted RBP4.78□□□□□ -1.64
CDH8-205ENST00000577730 HSPA13P48723 471 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 AARSP49588 968 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDH8-205ENST00000577730 EPHB1P54762 984 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DEFA1P59665 94 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DEFA3P59666 94 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 RESTQ13127 1097 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 DNAL1Q4LDG9 190 aa4.78□□□□□ -1.64
CDH8-205ENST00000577730 WASHC2DQ5SRD0 308 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms