RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 GTF2F1P35269 517 aaKnown RBP eCLIP5.64□□□□□ -1.51
TOP2A-203ENST00000577706 GJA9P57773 515 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 MAP4K2Q12851 820 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 LSAMPQ13449 338 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 CARFQ8N187 725 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 Q8N1Y9 231 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 ST13P5Q8NFI4 369 aaPredicted RBP5.64□□□□□ -1.51
TOP2A-203ENST00000577706 TMEM169Q96HH4 297 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 SRRDQ9UH36 339 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 MSRB2Q9Y3D2 182 aa5.64□□□□□ -1.51
TOP2A-203ENST00000577706 MYO1BO43795 1136 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 GTF2A2P52657 109 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 DLX2Q07687 328 aaPredicted RBP5.63□□□□□ -1.51
TOP2A-203ENST00000577706 MROH9Q5TGP6 573 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 YOD1Q5VVQ6 348 aaPredicted RBP5.63□□□□□ -1.51
TOP2A-203ENST00000577706 CPZQ66K79 652 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 USP53Q70EK8 1073 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 B3GNT8Q7Z7M8 397 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 DCP2Q8IU60 420 aaKnown RBP5.63□□□□□ -1.51
TOP2A-203ENST00000577706 SMARCC2Q8TAQ2 1214 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 OSBP2Q969R2 916 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 NOX5Q96PH1 765 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 AARSD1Q9BTE6 412 aaKnown RBP5.63□□□□□ -1.51
TOP2A-203ENST00000577706 LNPKQ9C0E8 428 aa5.63□□□□□ -1.51
TOP2A-203ENST00000577706 BLACEA4D250 179 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 IQCA1LA6NCM1 817 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 CCDC85CA6NKD9 419 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
TOP2A-203ENST00000577706 PDPK1O15530 556 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 FSHBP01225 129 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 FGFR1P11362 822 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
TOP2A-203ENST00000577706 CACNB2Q08289 660 aaPredicted RBP5.62□□□□□ -1.51
TOP2A-203ENST00000577706 NTRK3Q16288 839 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 NSMFQ6X4W1 530 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 MILR1Q7Z6M3 343 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 RIOX2Q8IUF8 465 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 FAM26EQ8N5C1 309 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 SLC16A11Q8NCK7 471 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 CPA5Q8WXQ8 436 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 SEC14L1Q92503 715 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 RBM15Q96T37 977 aaKnown RBP eCLIP5.62□□□□□ -1.51
TOP2A-203ENST00000577706 AP5M1Q9H0R1 490 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
TOP2A-203ENST00000577706 C1QTNF3-AMACRE9PGA6 284 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 H7BY64 318 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 SLC6A11P48066 632 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 RBL2Q08999 1139 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 DDX11Q96FC9 970 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 PHF20Q9BVI0 1012 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 SPATA9Q9BWV2 254 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 JAM3Q9BX67 310 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 CCDC113Q9H0I3 377 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 PPARGC1AQ9UBK2 798 aaKnown RBP5.61□□□□□ -1.51
TOP2A-203ENST00000577706 PFDN2Q9UHV9 154 aa5.61□□□□□ -1.51
TOP2A-203ENST00000577706 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 C8BP07358 591 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 SARSP49591 514 aaKnown RBP5.6□□□□□ -1.51
TOP2A-203ENST00000577706 RASGRF1Q13972 1273 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 STK32CQ86UX6 486 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 LRRC47Q8N1G4 583 aaKnown RBP5.6□□□□□ -1.51
TOP2A-203ENST00000577706 LOXL4Q96JB6 756 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 GPR27Q9NS67 375 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 NTMQ9P121 344 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 SIRPGQ9P1W8 387 aa5.6□□□□□ -1.51
TOP2A-203ENST00000577706 COA3Q9Y2R0 106 aaPredicted RBP5.6□□□□□ -1.51
TOP2A-203ENST00000577706 ADCY3O60266 1144 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 DIAPH1O60610 1272 aaKnown RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 TADA3O75528 432 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 RBM10P98175 930 aaKnown RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 NBPF6Q5VWK0 638 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 FOXB2Q5VYV0 432 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 STEAP3Q658P3 488 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 CD300LDQ6UXZ3 194 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 ZNF761Q86XN6 746 aaPredicted RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 TTC9BQ8N6N2 239 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 ARRDC4Q8NCT1 418 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 DCAF4Q8WV16 495 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 NBPF4Q96M43 638 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 C8orf49Q96NF6 230 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 SAMD11Q96NU1 681 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 GORASP1Q9BQQ3 440 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 C1QTNF3Q9BXJ4 246 aa5.59□□□□□ -1.51
TOP2A-203ENST00000577706 SPATA6Q9NWH7 488 aaPredicted RBP5.59□□□□□ -1.51
TOP2A-203ENST00000577706 ASXL2Q76L83 1435 aa5.58□□□□□ -1.52
TOP2A-203ENST00000577706 FAM221BA6H8Z2 402 aa5.58□□□□□ -1.52
TOP2A-203ENST00000577706 HGSO14964 777 aaPredicted RBP5.58□□□□□ -1.52
TOP2A-203ENST00000577706 ZNF20P17024 532 aa5.58□□□□□ -1.52
TOP2A-203ENST00000577706 STAT5AP42229 794 aa5.58□□□□□ -1.52
TOP2A-203ENST00000577706 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
TOP2A-203ENST00000577706 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms