RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PSMC6P62333 389 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 AP3B2Q13367 1082 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 DGKDQ16760 1214 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 HABP4Q5JVS0 413 aaKnown RBP26.91■■□□□ 1.9
SNF8-217ENST00000576353 MYSM1Q5VVJ2 828 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 MCTP2Q6DN12 878 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 PPTC7Q8NI37 304 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 ZMYND12Q9H0C1 365 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 TPCN1Q9ULQ1 816 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 GRIN2DO15399 1336 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 TRIM43BA6NCK2 446 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 KIAA0355O15063 1070 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 PPFIA3O75145 1194 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 CDKL5O76039 1030 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 GGPS1O95749 300 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 UBA1P22314 1058 aaKnown RBP26.9■■□□□ 1.9
SNF8-217ENST00000576353 GNA11P29992 359 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 NEK4P51957 841 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 SP2Q02086 613 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 NEDD9Q14511 834 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 SH3RF1Q7Z6J0 888 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 FAM126BQ8IXS8 530 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 CCDC148Q8NFR7 591 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 TRIM43Q96BQ3 446 aaPredicted RBP26.9■■□□□ 1.9
SNF8-217ENST00000576353 CDHR1Q96JP9 859 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 MLXIPQ9HAP2 919 aa26.9■■□□□ 1.9
SNF8-217ENST00000576353 DNAH12Q6ZR08 3092 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 A0A1W2PPC1 479 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 PFKFB2O60825 505 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 MDM2Q00987 491 aaPredicted RBP26.89■■□□□ 1.9
SNF8-217ENST00000576353 GPRASP2Q96D09 838 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 SPATA33Q96N06 139 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 SH3GLB2Q9NR46 395 aa26.89■■□□□ 1.9
SNF8-217ENST00000576353 PPFIA4O75335 1185 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 DEXIO95424 95 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 RAG1P15918 1043 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 CLK2P49760 499 aaKnown RBP26.88■■□□□ 1.89
SNF8-217ENST00000576353 GIMAP8Q8ND71 665 aaPredicted RBP26.88■■□□□ 1.89
SNF8-217ENST00000576353 BICD2Q8TD16 824 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 SENP7Q9BQF6 1050 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 ANO3Q9BYT9 981 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 UBE2OQ9C0C9 1292 aaKnown RBP26.88■■□□□ 1.89
SNF8-217ENST00000576353 UBIAD1Q9Y5Z9 338 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 KIAA1217Q5T5P2 1943 aa26.88■■□□□ 1.89
SNF8-217ENST00000576353 MAFGO15525 162 aa26.87■■□□□ 1.89
SNF8-217ENST00000576353 SCRN1Q12765 414 aa26.87■■□□□ 1.89
SNF8-217ENST00000576353 TMEM260Q9NX78 707 aa26.87■■□□□ 1.89
SNF8-217ENST00000576353 CD4P01730 458 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 ITGB5P18084 799 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 SEMA3FQ13275 785 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 NBPF20Q3BBV1 942 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 NFRKBQ6P4R8 1299 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 METTL7BQ6UX53 244 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 REXO1Q8N1G1 1221 aaKnown RBP26.86■■□□□ 1.89
SNF8-217ENST00000576353 JADE2Q9NQC1 790 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 VPS54Q9P1Q0 977 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 TBX21Q9UL17 535 aa26.86■■□□□ 1.89
SNF8-217ENST00000576353 SORBS3O60504 671 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 HOXD8P13378 290 aaPredicted RBP26.85■■□□□ 1.89
SNF8-217ENST00000576353 SREBF1P36956 1147 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 PTPN11Q06124 597 aaPredicted RBP26.85■■□□□ 1.89
SNF8-217ENST00000576353 MTMR1Q13613 665 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 HSDL1Q3SXM5 330 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 JAKMIP3Q5VZ66 844 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 FAM177A1Q8N128 213 aaPredicted RBP26.85■■□□□ 1.89
SNF8-217ENST00000576353 BADQ92934 168 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 PGBD1Q96JS3 809 aa26.85■■□□□ 1.89
SNF8-217ENST00000576353 NOP56O00567 594 aaKnown RBP26.84■■□□□ 1.89
SNF8-217ENST00000576353 SUPT20HL2P0C7V6 817 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 FAM47CQ5HY64 1035 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 CYFIP1Q7L576 1253 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 MXRA8Q9BRK3 442 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 KATNAL1Q9BW62 490 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 C22orf23Q9BZE7 217 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 PCDH10Q9P2E7 1040 aa26.84■■□□□ 1.89
SNF8-217ENST00000576353 TIMP1P01033 207 aa26.83■■□□□ 1.89
SNF8-217ENST00000576353 NLRP5P59047 1200 aa26.83■■□□□ 1.89
SNF8-217ENST00000576353 CHMP4BP1P59074 171 aa26.83■■□□□ 1.89
SNF8-217ENST00000576353 KAT2BQ92831 832 aa26.83■■□□□ 1.89
SNF8-217ENST00000576353 TRPV6Q9H1D0 765 aa26.83■■□□□ 1.89
SNF8-217ENST00000576353 B4GALT4O60513 344 aa26.82■■□□□ 1.88
SNF8-217ENST00000576353 ITGB8P26012 769 aa26.82■■□□□ 1.88
SNF8-217ENST00000576353 ARHGAP4P98171 946 aa26.82■■□□□ 1.88
SNF8-217ENST00000576353 CEP55Q53EZ4 464 aa26.82■■□□□ 1.88
SNF8-217ENST00000576353 BCAS3Q9H6U6 928 aa26.82■■□□□ 1.88
SNF8-217ENST00000576353 UPF2Q9HAU5 1272 aaKnown RBP26.82■■□□□ 1.88
SNF8-217ENST00000576353 F2P00734 622 aa26.81■■□□□ 1.88
SNF8-217ENST00000576353 ZNF76P36508 570 aa26.81■■□□□ 1.88
SNF8-217ENST00000576353 RBM25P49756 843 aaKnown RBP26.81■■□□□ 1.88
SNF8-217ENST00000576353 ME3Q16798 604 aa26.81■■□□□ 1.88
SNF8-217ENST00000576353 TDHQ8IZJ6 230 aa26.81■■□□□ 1.88
SNF8-217ENST00000576353 ATP9AO75110 1047 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 ZNF286BP0CG31 522 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 KCNA2P16389 499 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 PSEN2P49810 448 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 GALNT17Q6IS24 598 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 GTF3C6Q969F1 213 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 GPR20Q99678 358 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 KCNH7Q9NS40 1196 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 TRMT13Q9NUP7 481 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms