RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RILPQ96NA2 401 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 RFC4P35249 363 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 SCOCQ9UIL1 159 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 MAP3K15Q6ZN16 1313 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 GRID2IPA4D2P6 1211 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 MYO1FO00160 1098 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 POLE2P56282 527 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 SEPT2Q15019 361 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 TSC22D3Q99576 134 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 ADGRB3O60242 1522 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 KRT14P02533 472 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 DYNLL1P63167 89 aaKnown RBP14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 PSMD2Q13200 908 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 ARMC2Q8NEN0 867 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 CHRNDQ07001 517 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 BBOF1Q8ND07 529 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 YIPF3Q9GZM5 350 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 DDX47Q9H0S4 455 aaKnown RBP14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 PKD2L1Q9P0L9 805 aa14.27□□□□□ -0.12
PCDHGB3-201ENST00000576222 SLC1A4P43007 532 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEPT6Q14141 434 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 LGSNQ5TDP6 509 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 GDAP1Q8TB36 358 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAK16Q9BXY0 300 aaKnown RBP14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 CEP72Q9P209 647 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 SNX24Q9Y343 169 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 NEO1Q92859 1461 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 POC1B-GALNT4F8VUJ3 575 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 GFPT2O94808 682 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 SKIP12755 728 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.13
PCDHGB3-201ENST00000576222 ARHGAP42A6NI28 874 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 NDC80O14777 642 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 RCAN1P53805 252 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 RASGRF1Q13972 1273 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 SH2D4BQ5SQS7 431 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 OTUD6AQ7L8S5 288 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 TPH2Q8IWU9 490 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 THOC1Q96FV9 657 aaKnown RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANKZF1Q9H8Y5 726 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANAPC4Q9UJX5 808 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 ECEL1O95672 775 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 SMTNP53814 917 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 DPYDQ12882 1025 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 STRN3Q13033 797 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 DNAI2Q9GZS0 605 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 TBK1Q9UHD2 729 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEC24CP53992 1094 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAP7D1Q3KQU3 841 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 DCUN1D2Q6PH85 259 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 KCND1Q9NSA2 647 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 FBXL5Q9UKA1 691 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 CAPRIN2Q6IMN6 1127 aaKnown RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 NBPF10Q6P3W6 841 aaKnown RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEPT14Q6ZU15 432 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 ZIM3Q96PE6 472 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 MTA3Q9BTC8 594 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 AGPAT5Q9NUQ2 364 aa14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 PACSIN2Q9UNF0 486 aaPredicted RBP14.26□□□□□ -0.13
PCDHGB3-201ENST00000576222 CPDO75976 1380 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 NOL3O60936 208 aaKnown RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 RNASELQ05823 741 aaKnown RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 ALX1Q15699 326 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 VCX3AQ9NNX9 186 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 EXOC7Q9UPT5 735 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 FRMPD2Q68DX3 1309 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 PRR16Q569H4 304 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM83BQ5T0W9 1011 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 PALM2Q8IXS6 379 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 ELOA2Q8IYF1 753 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 BACH1O14867 736 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 PHBP35232 272 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 RABL6Q3YEC7 729 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANTXR2P58335 489 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms