RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ITGA4P13612 1032 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 TAX1BP1Q86VP1 789 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 STAMBPL1Q96FJ0 436 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 GDF3Q9NR23 364 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 A0A087X0T9 212 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 FAM228BP0C875 321 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 ANKRD20A8PQ5CZ79 823 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 SMIM5Q71RC9 77 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 RETREG2Q8NC44 543 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
SCARF1-209ENST00000576012 RBM28Q9NW13 759 aaKnown RBP15.98■□□□□ 0.15
SCARF1-209ENST00000576012 CD2APQ9Y5K6 639 aa15.98■□□□□ 0.15
SCARF1-209ENST00000576012 TRAF5O00463 557 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 DDR1Q08345 913 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 LLGL1Q15334 1064 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 HMGB1P1B2RPK0 211 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 ZNF844Q08AG5 666 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 UAP1Q16222 522 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 DYNLL2Q96FJ2 89 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 TMBIM4Q9HC24 238 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 PDE8AO60658 829 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 SLCO1A2P46721 670 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 ZNF526Q8TF50 670 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-209ENST00000576012 SGSM3Q96HU1 749 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 KBTBD4Q9NVX7 518 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 PNMA2Q9UL42 364 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 SIK3Q9Y2K2 1263 aa15.97■□□□□ 0.15
SCARF1-209ENST00000576012 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 DHX9Q08211 1270 aaKnown RBP15.96■□□□□ 0.15
SCARF1-209ENST00000576012 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 CDK5RAP3Q96JB5 506 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 ERGIC2Q96RQ1 377 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 KCNQ4P56696 695 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 CDC37Q16543 378 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-209ENST00000576012 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 GKAP1Q5VSY0 366 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-209ENST00000576012 MGARPQ8TDB4 240 aa15.96■□□□□ 0.15
SCARF1-209ENST00000576012 PYM1Q9BRP8 204 aaKnown RBP15.96■□□□□ 0.15
SCARF1-209ENST00000576012 ACTN1P12814 892 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 RPS6KA1Q15418 735 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 SFMBT2Q5VUG0 894 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-209ENST00000576012 MLXIPLQ9NP71 852 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 BIN2Q9UBW5 565 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TLR2O60603 784 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 STARD3NLO95772 234 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TNNC1P63316 161 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 KLHL30Q0D2K2 578 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TRIM51Q9BSJ1 452 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 STK38LQ9Y2H1 464 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TTI1O43156 1089 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 SART1O43290 800 aaKnown RBP15.95■□□□□ 0.14
SCARF1-209ENST00000576012 VIMP08670 466 aaKnown RBP15.95■□□□□ 0.14
SCARF1-209ENST00000576012 FGFR2P21802 821 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 EPS15P42566 896 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 TFAP4Q01664 338 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 KCNB1Q14721 858 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 ARFGAP2Q8N6H7 521 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 PCDHA6Q9UN73 950 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 PCDHA4Q9UN74 947 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 PCDHA8Q9Y5H6 950 aa15.95■□□□□ 0.14
SCARF1-209ENST00000576012 POTEMA6NI47 508 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 KRIT1O00522 736 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 GCFC2P16383 781 aaKnown RBP15.94■□□□□ 0.14
SCARF1-209ENST00000576012 CCDC38Q502W7 563 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 PDXDC1Q6P996 788 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 BAP1Q92560 729 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 ELAC2Q9BQ52 826 aaKnown RBP15.94■□□□□ 0.14
SCARF1-209ENST00000576012 MYMKA6NI61 221 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 TRAPPC3O43617 180 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 KIF1CO43896 1103 aaKnown RBP15.94■□□□□ 0.14
SCARF1-209ENST00000576012 USP17L8P0C7I0 530 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 GCKP35557 465 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 PPP2R2AP63151 447 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 ARL6IP4Q66PJ3 421 aaKnown RBP15.94■□□□□ 0.14
SCARF1-209ENST00000576012 C6orf89Q6UWU4 347 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 KIF2BQ8N4N8 673 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 SLC44A5Q8NCS7 719 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 NSMCE1Q8WV22 266 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 MCM9Q9NXL9 1143 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 ECM29Q5VYK3 1845 aa15.94■□□□□ 0.14
SCARF1-209ENST00000576012 ENO4A6NNW6 628 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 A6NNZ2 444 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 IL2RBP14784 551 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 PRLRP16471 622 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CHRNDQ07001 517 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 MAN2A1Q16706 1144 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TUBB8Q3ZCM7 444 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms