RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 H3BQ06 376 aaPredicted RBP10.51□□□□□ -0.73
SMG6-218ENST00000575454 TGFB3P10600 412 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
SMG6-218ENST00000575454 ZP2Q05996 745 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 PKN1Q16512 942 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
SMG6-218ENST00000575454 MCMDC2Q4G0Z9 681 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMG6-218ENST00000575454 SERINC5Q86VE9 423 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 TMEM192Q8IY95 271 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 TOP1MTQ969P6 601 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 FBXL18Q96ME1 805 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
SMG6-218ENST00000575454 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 BRWD1Q9NSI6 2320 aa10.51□□□□□ -0.73
SMG6-218ENST00000575454 C17orf102A2RUQ5 167 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 RB1P06400 928 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 NR3C2P08235 984 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 GNAT1P11488 350 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 EIF2AK2P19525 551 aaKnown RBP10.5□□□□□ -0.73
SMG6-218ENST00000575454 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
SMG6-218ENST00000575454 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
SMG6-218ENST00000575454 MBTPS1Q14703 1052 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 TCTN1Q2MV58 587 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 ASPRV1Q53RT3 343 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 PLEKHG4Q58EX7 1191 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 EP400NLQ6ZTU2 488 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 APBB2Q92870 758 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 SPATA33Q96N06 139 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 PRRX2Q99811 253 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 UBA5Q9GZZ9 404 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 KAT14Q9H8E8 782 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 ZDBF2Q9HCK1 2354 aa10.5□□□□□ -0.73
SMG6-218ENST00000575454 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
SMG6-218ENST00000575454 GOLGA8HP0CJ92 632 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 ZNF200P98182 395 aaPredicted RBP10.49□□□□□ -0.73
SMG6-218ENST00000575454 TRAF1Q13077 416 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 CELF3Q5SZQ8 465 aaKnown RBP10.49□□□□□ -0.73
SMG6-218ENST00000575454 C20orf194Q5TEA3 1177 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 ADGRF4Q8IZF3 695 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 TBC1D5Q92609 795 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 IL17RAQ96F46 866 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 SNX27Q96L92 541 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 C11orf84Q9BUA3 381 aaPredicted RBP10.49□□□□□ -0.73
SMG6-218ENST00000575454 IFIH1Q9BYX4 1025 aaKnown RBP10.49□□□□□ -0.73
SMG6-218ENST00000575454 LMAN2LQ9H0V9 348 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 CLDND1Q9NY35 253 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 COL20A1Q9P218 1284 aa10.49□□□□□ -0.73
SMG6-218ENST00000575454 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
SMG6-218ENST00000575454 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 H3BRB1 525 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 CFBP00751 764 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 GHRHRQ02643 423 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 SMAD2Q15796 467 aaKnown RBP10.48□□□□□ -0.73
SMG6-218ENST00000575454 QRICH1Q2TAL8 776 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 HSDL1Q3SXM5 330 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
SMG6-218ENST00000575454 VSIG10LQ86VR7 867 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 FIBCD1Q8N539 461 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 OTUD7AQ8TE49 926 aaPredicted RBP10.48□□□□□ -0.73
SMG6-218ENST00000575454 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 WNT8BQ93098 351 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 PPP2R3CQ969Q6 453 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 PDCD2LQ9BRP1 358 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 AMNQ9BXJ7 453 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 USP26Q9BXU7 913 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 TUT1Q9H6E5 874 aaKnown RBP10.48□□□□□ -0.73
SMG6-218ENST00000575454 MLXIPQ9HAP2 919 aa10.48□□□□□ -0.73
SMG6-218ENST00000575454 C5orf67F2Z3F1 127 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 ZNF213O14771 459 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 UPP2O95045 317 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 GGPS1O95749 300 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 PARP1P09874 1014 aaKnown RBP10.47□□□□□ -0.73
SMG6-218ENST00000575454 SMIM10L2AP0DMW4 78 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 SMIM10L2BP0DMW5 78 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
SMG6-218ENST00000575454 HOXC8P31273 242 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 HSD17B4P51659 736 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 HAND2P61296 217 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 STOX1Q6ZVD7 989 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 HFE2Q6ZVN8 426 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 RPAINQ86UA6 219 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
SMG6-218ENST00000575454 C5orf42Q9H799 3197 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.73
SMG6-218ENST00000575454 RGS20O76081 388 aa10.46□□□□□ -0.73
SMG6-218ENST00000575454 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms