RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 HNRNPABQ99729 332 aaKnown RBP8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 SLF1Q9BQI6 1058 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 CNOT10Q9H9A5 744 aaKnown RBP8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 PARVBQ9HBI1 364 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 LZTFL1Q9NQ48 299 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 PANK4Q9NVE7 773 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 SAR1BQ9Y6B6 198 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 KIF1BO60333 1816 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 TMEM131LA2VDJ0 1609 aa8.72□□□□□ -1.01
TOM1L1-220ENST00000575333 MROH7Q68CQ1 1323 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ASAP2O43150 1006 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 TBCAO75347 108 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ABL1P00519 1130 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 LMNAP02545 664 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ASLP04424 464 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ALDH2P05091 517 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ITGA2BP08514 1039 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 GNAZP19086 355 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 POLR2EP19388 210 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 SEC24CP53992 1094 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 PPIDQ08752 370 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 KPNB1Q14974 876 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 DAB2IPQ5VWQ8 1189 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 CEP85Q6P2H3 762 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 FERMT3Q86UX7 667 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 C11orf74Q86VG3 221 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 KCTD17Q8N5Z5 321 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 RETREG2Q8NC44 543 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 NOC3LQ8WTT2 800 aaKnown RBP8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 CENPTQ96BT3 561 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 SPATA16Q9BXB7 569 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 KRT23Q9C075 422 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 SSX2IPQ9Y2D8 614 aa8.71□□□□□ -1.01
TOM1L1-220ENST00000575333 ATP7BP35670 1465 aa8.71□□□□□ -1.02
TOM1L1-220ENST00000575333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TBKBP1A7MCY6 615 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC3A2P08195 630 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SKIP12755 728 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PSMA5P28066 241 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RFC5P40937 340 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TMPOP42166 694 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SKIV2L2P42285 1042 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 VAV2P52735 878 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 HPCAP84074 193 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 MCL1Q07820 350 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 MTX1Q13505 466 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 FXNQ16595 210 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SPRED3Q2MJR0 410 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RNF220Q5VTB9 566 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 NCAPH2Q6IBW4 605 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CYP26C1Q6V0L0 522 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC129Q6ZRS4 1044 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PHLDB2Q86SQ0 1253 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 IQCKQ8N0W5 287 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RNF10Q8N5U6 811 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 FSIP1Q8NA03 581 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CASP10Q92851 521 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CCT7Q99832 543 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RAB17Q9H0T7 212 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 FANCLQ9NW38 375 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SEL1LQ9UBV2 794 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SAP30BPQ9UHR5 308 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TTC7AQ9ULT0 858 aaPredicted RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ZFYVE9O95405 1425 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 A0A0J9YVX5 310 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 IQCA1LA6NCM1 817 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 STRNO43815 780 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ORC4O43929 436 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PARNO95453 639 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CHGBP05060 677 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CALB2P22676 271 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PEX5P50542 639 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ALDH5A1P51649 535 aaPredicted RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 GUCY1B3Q02153 619 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ARHGEF6Q15052 776 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RASIP1Q5U651 963 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 OLFM4Q6UX06 510 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TBC1D1Q86TI0 1168 aaPredicted RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TMTC1Q8IUR5 882 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CNGA4Q8IV77 575 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 MAP7D3Q8IWC1 876 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms