RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	TROAP	Q12815	778 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	UAP1	Q16222	522 aa	Predicted RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	ACCSL	Q4AC99	568 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	TDRD12	Q587J7	1177 aa	Known RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	ANKRD23	Q86SG2	305 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085		H0YGN5	161 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	DNAJC8	O75937	253 aa	Predicted RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	ATP6V1G2	O95670	118 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	SCG2	P13521	617 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	ERVK-9	P63128	1117 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	PUM3	Q15397	648 aa	Known RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	C1QTNF12	Q5T7M4	302 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	CCDC47	Q96A33	483 aa	Known RBP	13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	NDST4	Q9H3R1	872 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	BAIAP2L1	Q9UHR4	511 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	NFS1	Q9Y697	457 aa		13.99	□□□□□ -0.17
TRPV1-208	ENST00000574085	PHF20L1	A8MW92	1017 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	SKAP2	O75563	359 aa	Predicted RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CTSW	P56202	376 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	ASIC1	P78348	528 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	ELF3	P78545	371 aa	Predicted RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	BIRC3	Q13489	604 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	RBBP5	Q15291	538 aa	Known RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	ASTE1	Q2TB18	679 aa	Predicted RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CPLX4	Q7Z7G2	160 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	KLHL23	Q8NBE8	558 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	MICAL1	Q8TDZ2	1067 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CCT6B	Q92526	530 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	INPP4A	Q96PE3	977 aa	Predicted RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	ISCU	Q9H1K1	167 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	NOD2	Q9HC29	1040 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	FAM205A	Q6ZU69	1335 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	SNAP23	O00161	211 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CALM1	P0DP23	149 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CALM2	P0DP24	149 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	CALM3	P0DP25	149 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	ECHS1	P30084	290 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	GCK	P35557	465 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	RPS6KA3	P51812	740 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	EHHADH	Q08426	723 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	PSMD2	Q13200	908 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	TRIM28	Q13263	835 aa	Known RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	RUFY4	Q6ZNE9	571 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	RASGRP4	Q8TDF6	673 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	BAP1	Q92560	729 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	HPS3	Q969F9	1004 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	RSRC1	Q96IZ7	334 aa	Known RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	TMEM60	Q9H2L4	133 aa		13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	NOVA2	Q9UNW9	492 aa	Known RBP	13.98	□□□□□ -0.17
TRPV1-208	ENST00000574085	BUB1B	O60566	1050 aa	Predicted RBP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	SNUPN	O95149	360 aa	Known RBP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	MYB	P10242	640 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	PDXDC1	Q6P996	788 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	CACNA2D4	Q7Z3S7	1137 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	LRRC45	Q96CN5	670 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	DOCK2	Q92608	1830 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	BCOR	Q6W2J9	1755 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	TNS3	Q68CZ2	1445 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	GHR	P10912	638 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	PPP1R7	Q15435	360 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	KIF6	Q6ZMV9	814 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	ARMC9	Q7Z3E5	817 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	USP38	Q8NB14	1042 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	P3H4	Q92791	437 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	KDM4C	Q9H3R0	1056 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	SEMA6B	Q9H3T3	888 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	KCP	Q6ZWJ8	1503 aa		13.97	□□□□□ -0.17
TRPV1-208	ENST00000574085	ALS2	Q96Q42	1657 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	CYP2D7	A0A087X1C5	515 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	DCDC2C	A8MYV0	355 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	PAEP	P09466	180 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	PLCG1	P19174	1290 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	MAGOH	P61326	146 aa	Known RBP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	MEI1	Q5TIA1	1274 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	TAX1BP1	Q86VP1	789 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	PARD3B	Q8TEW8	1205 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	CUL5	Q93034	780 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	MAGOHB	Q96A72	148 aa	Known RBP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	STAMBPL1	Q96FJ0	436 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	TRIM9	Q9C026	710 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	NEUROG2	Q9H2A3	272 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	DDAH1	O94760	285 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	FGFR2	P21802	821 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	DRD4	P21917	467 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	SLC8A3	P57103	927 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	MAN2A1	Q16706	1144 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	PFKFB3	Q16875	520 aa	Predicted RBP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	AGBL2	Q5U5Z8	902 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	HGSNAT	Q68CP4	663 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	CCDC84	Q86UT8	332 aa	Predicted RBP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	BLID	Q8IZY5	108 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	CCSER1	Q9C0I3	900 aa		13.96	□□□□□ -0.17
TRPV1-208	ENST00000574085	KIF9	Q9HAQ2	790 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms