RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 LGR6Q9HBX8 967 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 PRDM10Q9NQV6 1147 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TOPORSQ9NS56 1045 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 CLEC1BQ9P126 229 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 LUZP4Q9P127 313 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 GMPR2Q9P2T1 348 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 SWAP70Q9UH65 585 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 FBXO9Q9UK97 447 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 KCNH3Q9ULD8 1083 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TPX2Q9ULW0 747 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 MINPP1Q9UNW1 487 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 DMTF1Q9Y222 760 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 PCDHA2Q9Y5H9 948 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 PPP2R3BQ9Y5P8 575 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 ACTL7BQ9Y614 415 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TRBV23OR9-2A0A075B6M9 112 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 KLRG2A4D1S0 409 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 F5H423 210 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 KRT37O76014 449 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 NID1P14543 1247 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 IFNGR1P15260 489 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 YBX3P16989 372 aaKnown RBP eCLIP2.6□□□□□ -1.99
CHD3-217ENST00000574022 ZKSCAN1P17029 563 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 RHCEP18577 417 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 PAMP19021 973 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 SLC9A1P19634 815 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 AMPD1P23109 780 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 CTSKP43235 329 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 USP14P54578 494 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 RAC1P63000 192 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 PHC1P78364 1004 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 LACTBP83111 547 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 SMAD3P84022 425 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 RHDQ02161 417 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 COL9A3Q14050 684 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 SLC9A5Q14940 896 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 KRT72Q14CN4 511 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 LLGL1Q15334 1064 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 SMAD2Q15796 467 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 CLEC16AQ2KHT3 1053 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 PLA2G4EQ3MJ16 856 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 ALFQ53S48 1182 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 EEF1DP3Q658K8 133 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 CREB3L3Q68CJ9 461 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 ANKRD34AQ69YU3 496 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 CCDC70Q6NSX1 233 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 TTLL7Q6ZT98 887 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 FRMD7Q6ZUT3 714 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 OTOP1Q7RTM1 612 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 OSTM1Q86WC4 334 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 KSR1Q8IVT5 923 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 TEX2Q8IWB9 1127 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 MIER2Q8N344 545 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 GPR161Q8N6U8 529 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 ZNF610Q8N9Z0 462 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 RCBTB1Q8NDN9 531 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 JADE3Q92613 823 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 COX4I2Q96KJ9 171 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 SCLT1Q96NL6 688 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 TAAR9Q96RI9 348 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 KCNJ15Q99712 375 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 ACO2Q99798 780 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 BOCQ9BWV1 1114 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 CSRNP2Q9H175 543 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 TMX4Q9H1E5 349 aaPredicted RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 ACSS3Q9H6R3 686 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 FAM204AQ9H8W3 233 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 NGRNQ9NPE2 291 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 TOMM22Q9NS69 142 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 GTF2IRD1Q9UHL9 959 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 CBLCQ9ULV8 474 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 DNM3Q9UQ16 869 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 LZTS1Q9Y250 596 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 PTPN22Q9Y2R2 807 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 DAGLAQ9Y4D2 1042 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 LAS1LQ9Y4W2 734 aaKnown RBP2.6□□□□□ -1.99
CHD3-217ENST00000574022 SPO11Q9Y5K1 396 aa2.6□□□□□ -1.99
CHD3-217ENST00000574022 NPHP3-ACAD11A0A0J9YXS1 232 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 ABHD14A-ACY1A0A1B0GW23 586 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 SLC12A8A0AV02 714 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 C11orf95C9JLR9 678 aaPredicted RBP2.59□□□□□ -1.99
CHD3-217ENST00000574022 TPP1O14773 563 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 SART1O43290 800 aaKnown RBP2.59□□□□□ -1.99
CHD3-217ENST00000574022 MYO1BO43795 1136 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 PIP5K1CO60331 668 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 NBNO60934 754 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 ZRANB2O95218 330 aaKnown RBP eCLIP2.59□□□□□ -1.99
CHD3-217ENST00000574022 CBX7O95931 251 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 ZBED1O96006 694 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 NFICP08651 508 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 POU2F2P09086 479 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 GSTM1P09488 218 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 ZBTB48P10074 688 aaPredicted RBP2.59□□□□□ -1.99
CHD3-217ENST00000574022 MYBP10242 640 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 VAV1P15498 845 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 PDE6AP16499 860 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 TYRP1P17643 537 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 KRT15P19012 456 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 RAB6AP20340 208 aa2.59□□□□□ -1.99
CHD3-217ENST00000574022 BDNFP23560 247 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms