RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZPR1O75312 459 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 NOL4O94818 638 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 TMEM119Q4V9L6 283 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 KRT79Q5XKE5 535 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 TSG101Q99816 390 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 CAPS2Q9BXY5 557 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 RIC8AQ9NPQ8 531 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 NAP1L1P55209 391 aaKnown RBP21.07■□□□□ 0.96
SCARF1-206ENST00000573852 ZCWPW2Q504Y3 356 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 TTMPQ5BVD1 217 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 PACS2Q86VP3 889 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 RNF10Q8N5U6 811 aaKnown RBP21.07■□□□□ 0.96
SCARF1-206ENST00000573852 CAVIN3Q969G5 261 aa21.07■□□□□ 0.96
SCARF1-206ENST00000573852 RBAK-RBAKDNI3L0D1 243 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 RPS6KA4O75676 772 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 PDHBP11177 359 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 TNFRSF8P28908 595 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 ADCY7P51828 1080 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 PSMD2Q13200 908 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 GJA10Q969M2 543 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 DNAJC19Q96DA6 116 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 RABEP2Q9H5N1 569 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 COL4A3BPQ9Y5P4 624 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 TNRC6CQ9HCJ0 1690 aaKnown RBP21.06■□□□□ 0.96
SCARF1-206ENST00000573852 GRIN2DO15399 1336 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 OPA1O60313 960 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 GLI1P08151 1106 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 CCT5P48643 541 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 APBA1Q02410 837 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 ZNF804AQ7Z570 1209 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 MYOCDQ8IZQ8 938 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 RAB34Q9BZG1 259 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 ZNF831Q5JPB2 1677 aa21.06■□□□□ 0.96
SCARF1-206ENST00000573852 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 TRAF5O00463 557 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 NOP2P46087 812 aaKnown RBP21.05■□□□□ 0.96
SCARF1-206ENST00000573852 NOVP48745 357 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 COASYQ13057 564 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 FAM83BQ5T0W9 1011 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 ALS2CLQ60I27 953 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 TTC19Q6DKK2 380 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-206ENST00000573852 IPO4Q8TEX9 1081 aaKnown RBP21.05■□□□□ 0.96
SCARF1-206ENST00000573852 FGFBP2Q9BYJ0 223 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 CEP72Q9P209 647 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 GNPATO15228 680 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 EPB41P11171 864 aaKnown RBP21.05■□□□□ 0.96
SCARF1-206ENST00000573852 SLC9C1Q4G0N8 1177 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 CFAP221Q4G0U5 840 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 PROM2Q8N271 834 aa21.05■□□□□ 0.96
SCARF1-206ENST00000573852 ZSCAN5CA6NGD5 496 aaPredicted RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 DNA2P51530 1060 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 GNGT1P63211 74 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 FKBP3Q00688 224 aaKnown RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 CCDC40Q4G0X9 1142 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 SFMBT2Q5VUG0 894 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 HSF2BPO75031 334 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 PALMO75781 387 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 SERPING1P05155 500 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 TNNI2P48788 182 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 CARSP49589 748 aaKnown RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 POLR2FP61218 127 aaKnown RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 UBE2SQ16763 222 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 GLE1Q53GS7 698 aaKnown RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 GBP6Q6ZN66 633 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 BARGINQ6ZT62 677 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 ZIM3Q96PE6 472 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 LSM14BQ9BX40 385 aaKnown RBP21.04■□□□□ 0.96
SCARF1-206ENST00000573852 TBC1D7Q9P0N9 293 aa21.04■□□□□ 0.96
SCARF1-206ENST00000573852 EIF3HO15372 352 aaKnown RBP eCLIP21.03■□□□□ 0.96
SCARF1-206ENST00000573852 FTCDO95954 541 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 FAM153BP0C7A2 387 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 RHBDL3P58872 404 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 GRAPQ13588 217 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 FAM153CQ494X1 144 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 FOXR2Q6PJQ5 311 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 GRAPLQ8TC17 118 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-206ENST00000573852 PPM1EQ8WY54 764 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 LRRC27Q9C0I9 530 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 GDF3Q9NR23 364 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 FAM153AQ9UHL3 310 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 TSKSQ9UJT2 592 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 ESYT3A0FGR9 886 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 hCG_1984214I3L0E3 225 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 TTC31Q49AM3 519 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-206ENST00000573852 LRRC47Q8N1G4 583 aaKnown RBP21.03■□□□□ 0.96
SCARF1-206ENST00000573852 ZNF713Q8N859 430 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-206ENST00000573852 BCAS4Q8TDM0 211 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 HAS1Q92839 578 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 PANK4Q9NVE7 773 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 NFU1Q9UMS0 254 aa21.03■□□□□ 0.96
SCARF1-206ENST00000573852 KLRC1P26715 233 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 NAB2Q15742 525 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 FAM26FQ5R3K3 315 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 SYN2Q92777 582 aaPredicted RBP21.02■□□□□ 0.96
SCARF1-206ENST00000573852 RUFY1Q96T51 708 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 RC3H1Q5TC82 1133 aaKnown RBP21.02■□□□□ 0.96
SCARF1-206ENST00000573852 ARHGAP27Q6ZUM4 889 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms