RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ZNF286BP0CG31 522 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 CCND2P30279 289 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 RBL2Q08999 1139 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 LAMC2Q13753 1193 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 BRDTQ58F21 947 aaPredicted RBP19.97■□□□□ 0.79
SMG6-212ENST00000573153 PSRC1Q6PGN9 363 aaPredicted RBP19.97■□□□□ 0.79
SMG6-212ENST00000573153 WNT8BQ93098 351 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 FAM161BQ96MY7 647 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 C16orf70Q9BSU1 422 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 SEMA6BQ9H3T3 888 aa19.97■□□□□ 0.79
SMG6-212ENST00000573153 SPATA31C2B4DYI2 1134 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 SORBS3O60504 671 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 TGFB3P10600 412 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 HOXC8P31273 242 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 PBX2P40425 430 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 DGKDQ16760 1214 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 TRIM71Q2Q1W2 868 aaKnown RBP19.96■□□□□ 0.79
SMG6-212ENST00000573153 PCNX4Q63HM2 1172 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 TRAF7Q6Q0C0 670 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 CCDC82Q8N4S0 544 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 AGXT2Q9BYV1 514 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 GTF2IRD1Q9UHL9 959 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 GBF1Q92538 1859 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 TET1Q8NFU7 2136 aa19.96■□□□□ 0.79
SMG6-212ENST00000573153 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.95■□□□□ 0.78
SMG6-212ENST00000573153 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.95■□□□□ 0.78
SMG6-212ENST00000573153 PITPNM1O00562 1244 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 HMGB1P09429 215 aaKnown RBP19.95■□□□□ 0.78
SMG6-212ENST00000573153 SUPT20HL2P0C7V6 817 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 CASTP20810 708 aaKnown RBP19.95■□□□□ 0.78
SMG6-212ENST00000573153 DNAJB2P25686 324 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 PSEN2P49810 448 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 UBE2SQ16763 222 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 FAM47CQ5HY64 1035 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 ZNF697Q5TEC3 545 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 KCNV1Q6PIU1 500 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 DHX37Q8IY37 1157 aaKnown RBP19.95■□□□□ 0.78
SMG6-212ENST00000573153 FBXL16Q8N461 479 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 PBX4Q9BYU1 374 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 HDAC6Q9UBN7 1215 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
SMG6-212ENST00000573153 TMEM265A0A087WTH1 108 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 STAM2O75886 525 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 REC8O95072 547 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 RCAN1P53805 252 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 SPATA33Q96N06 139 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 CDX2Q99626 313 aaPredicted RBP19.94■□□□□ 0.78
SMG6-212ENST00000573153 RTEL1Q9NZ71 1219 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 SEC63Q9UGP8 760 aaKnown RBP19.94■□□□□ 0.78
SMG6-212ENST00000573153 PTPRSQ13332 1948 aa19.94■□□□□ 0.78
SMG6-212ENST00000573153 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 ADAMTS3O15072 1205 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 PPFIA4O75335 1185 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 IQCF3P0C7M6 154 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 ITGB5P18084 799 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 MFSD10Q14728 455 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 RTN1Q16799 776 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 OTOP2Q7RTS6 562 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 SMARCC2Q8TAQ2 1214 aa19.93■□□□□ 0.78
SMG6-212ENST00000573153 ZBTB43O43298 467 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 FIBPO43427 364 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 ATP9AO75110 1047 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 FGBP02675 491 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 ZNF200P98182 395 aaPredicted RBP19.92■□□□□ 0.78
SMG6-212ENST00000573153 PTGISQ16647 500 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 KIAA0753Q2KHM9 967 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 TCTN1Q2MV58 587 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 XRRA1Q6P2D8 792 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 GPR20Q99678 358 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 PSTPIP2Q9H939 334 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 RBM28Q9NW13 759 aaKnown RBP19.92■□□□□ 0.78
SMG6-212ENST00000573153 YBX2Q9Y2T7 364 aaKnown RBP19.92■□□□□ 0.78
SMG6-212ENST00000573153 UBIAD1Q9Y5Z9 338 aa19.92■□□□□ 0.78
SMG6-212ENST00000573153 TRIP12Q14669 1992 aaPredicted RBP19.92■□□□□ 0.78
SMG6-212ENST00000573153 STXBP3O00186 592 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 LGALS2P05162 132 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 KCNA2P16389 499 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 CLK2P49760 499 aaKnown RBP19.91■□□□□ 0.78
SMG6-212ENST00000573153 GRIN2CQ14957 1233 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 METTL7BQ6UX53 244 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 JAKMIP1Q96N16 626 aaKnown RBP19.91■□□□□ 0.78
SMG6-212ENST00000573153 SENP7Q9BQF6 1050 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 ALG1Q9BT22 464 aa19.91■□□□□ 0.78
SMG6-212ENST00000573153 GOLGA8AA7E2F4 631 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 GOLGA8BA8MQT2 603 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 CENPBP07199 599 aaPredicted RBP19.9■□□□□ 0.78
SMG6-212ENST00000573153 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 ADD1P35611 737 aaKnown RBP19.9■□□□□ 0.78
SMG6-212ENST00000573153 EVCP57679 992 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 APOBRQ0VD83 1088 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 MBTPS1Q14703 1052 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 NTRK3Q16288 839 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 SYNE3Q6ZMZ3 975 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 Q6ZUG5 572 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 CYFIP1Q7L576 1253 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 HEATR3Q7Z4Q2 680 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 TEX2Q8IWB9 1127 aa19.9■□□□□ 0.78
SMG6-212ENST00000573153 MYLIPQ8WY64 445 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms