RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 CPXCR1Q8N123 301 aa7.5□□□□□ -1.21
PRPF8-204ENST00000572445 LRRC47Q8N1G4 583 aaKnown RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 ZNF512BQ96KM6 892 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
PRPF8-204ENST00000572445 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
PRPF8-204ENST00000572445 FOXD3Q9UJU5 478 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 ZHX1Q9UKY1 873 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 V9GY48 417 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 GREB1LQ9C091 1923 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-204ENST00000572445 COL6A3P12111 3177 aa7.5□□□□□ -1.21
PRPF8-204ENST00000572445 TCRBV5S4A2TA0A5A2 114 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 DNM1LO00429 736 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 CPNE3O75131 537 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 HMMRO75330 724 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 STK10O94804 968 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 EEF2P13639 858 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 PTGS1P23219 599 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 BMP8BP34820 402 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 ADD2P35612 726 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 CDK8P49336 464 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 GABPAQ06546 454 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 COG2Q14746 738 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 TMEM132BQ14DG7 1078 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 SHHQ15465 462 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 C20orf194Q5TEA3 1177 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 DIEXFQ68CQ4 756 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 LBX2Q6XYB7 198 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 PPM1EQ8WY54 764 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 MYLIPQ8WY64 445 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 LPAR1Q92633 364 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 KIF1BPQ96EK5 621 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 RNPC3Q96LT9 517 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.49□□□□□ -1.217e-14■□□□□ 10.1
PRPF8-204ENST00000572445 XPNPEP3Q9NQH7 507 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 PDLIM7Q9NR12 457 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 GINM1Q9NU53 330 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 DDX49Q9Y6V7 483 aaKnown RBP7.49□□□□□ -1.21
PRPF8-204ENST00000572445 LRRC37A2A6NM11 1700 aa7.49□□□□□ -1.21
PRPF8-204ENST00000572445 TRIM43BA6NCK2 446 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 MYADML2A6NDP7 307 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 RBAK-RBAKDNI3L0D1 243 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 ADH1CP00326 375 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 APPP05067 770 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 RARBP10826 455 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 FCER1AP12319 257 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 TXLNAP40222 546 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 TDO2P48775 406 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 PTPN5P54829 565 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 SNAP25P60880 206 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 TLE2Q04725 743 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 IKQ13123 557 aaPredicted RBP7.48□□□□□ -1.21
PRPF8-204ENST00000572445 KCTD2Q14681 263 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 LRRC41Q15345 812 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 LRIT3Q3SXY7 679 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 HSP90AB4PQ58FF6 505 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 SNRNP48Q6IEG0 339 aaKnown RBP7.48□□□□□ -1.21
PRPF8-204ENST00000572445 SLC39A5Q6ZMH5 540 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 RASGRP2Q7LDG7 609 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 ERMP1Q7Z2K6 904 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 CERS3Q8IU89 383 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
PRPF8-204ENST00000572445 SIRT2Q8IXJ6 389 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 CCDC74AQ96AQ1 378 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 TRIM43Q96BQ3 446 aaPredicted RBP7.48□□□□□ -1.21
PRPF8-204ENST00000572445 MAML3Q96JK9 1138 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.48□□□□□ -1.213e-7■■□□□ 13.5
PRPF8-204ENST00000572445 PUS7LQ9H0K6 701 aaKnown RBP7.48□□□□□ -1.21
PRPF8-204ENST00000572445 VCPKMTQ9H867 229 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 SWAP70Q9UH65 585 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 LCTP09848 1927 aa7.48□□□□□ -1.21
PRPF8-204ENST00000572445 M0R2C6 588 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 WDR46O15213 610 aaKnown RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 SEPT4O43236 478 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 SIAH2O43255 324 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 MSCO60682 206 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 USP17L7P0C7H9 530 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 FOSL2P15408 326 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 ITGB8P26012 769 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 CLN3Q13286 438 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 ARRDC4Q8NCT1 418 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 MAFAQ8NHW3 353 aaPredicted RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 CDX2Q99626 313 aaPredicted RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 SH2D4AQ9H788 454 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 RAVER2Q9HCJ3 691 aaKnown RBP7.47□□□□□ -1.21
PRPF8-204ENST00000572445 SLC5A4Q9NY91 659 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 HOXC10Q9NYD6 342 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 CNPY2Q9Y2B0 182 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 ZBED9Q6R2W3 1325 aa7.47□□□□□ -1.21
PRPF8-204ENST00000572445 TCF20Q9UGU0 1960 aaKnown RBP7.46□□□□□ -1.21
PRPF8-204ENST00000572445 SCN5AQ14524 2016 aa7.46□□□□□ -1.22
PRPF8-204ENST00000572445 A0A1W2PQ45 241 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms