RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
TVP23A-205ENST00000572428 USP11P51784 963 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 CLPPQ16740 277 aaPredicted RBP9.92□□□□□ -0.82
TVP23A-205ENST00000572428 SBK1Q52WX2 424 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 ZDHHC15Q96MV8 337 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 BRD8Q9H0E9 1235 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 ARMT1Q9H993 441 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 FANCFQ9NPI8 374 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 ATP8A2Q9NTI2 1148 aa9.92□□□□□ -0.82
TVP23A-205ENST00000572428 SCHIP1Q9P0W5 487 aaPredicted RBP9.92□□□□□ -0.82
TVP23A-205ENST00000572428 DDX41Q9UJV9 622 aaKnown RBP9.92□□□□□ -0.82
TVP23A-205ENST00000572428 WDR19Q8NEZ3 1342 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 CPA1P15085 419 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 PDCP20941 246 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 NT5C2P49902 561 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
TVP23A-205ENST00000572428 C11orf74Q86VG3 221 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 TMEM87AQ8NBN3 555 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 CEP295NLQ96MC4 621 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 MAK16Q9BXY0 300 aaKnown RBP9.91□□□□□ -0.82
TVP23A-205ENST00000572428 ENAMQ9NRM1 1142 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 PSD3Q9NYI0 1048 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 PRELID1Q9Y255 219 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 TIMM22Q9Y584 194 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 GTPBP10A4D1E9 387 aaKnown RBP9.91□□□□□ -0.82
TVP23A-205ENST00000572428 PLCG2P16885 1265 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
TVP23A-205ENST00000572428 CYP26C1Q6V0L0 522 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 MMS22LQ6ZRQ5 1243 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 GOLGA5Q8TBA6 731 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 DDX12PQ92771 950 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 SERINC2Q96SA4 455 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 TINF2Q9BSI4 451 aa9.91□□□□□ -0.82
TVP23A-205ENST00000572428 NDUFB5O43674 189 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 BAG3O95817 575 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 NDUFV2P19404 249 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 TRIM21P19474 475 aaKnown RBP9.9□□□□□ -0.82
TVP23A-205ENST00000572428 SYT1P21579 422 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 ME3Q16798 604 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
TVP23A-205ENST00000572428 RTL10Q7L3V2 364 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 TMC6Q7Z403 805 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 BRSK2Q8IWQ3 736 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 CORO1BQ9BR76 489 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 JAG2Q9Y219 1238 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 DAGLAQ9Y4D2 1042 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 G3V3G9 751 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 GJB2P29033 226 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 DYNLL1P63167 89 aaKnown RBP9.9□□□□□ -0.82
TVP23A-205ENST00000572428 CCDC173Q0VFZ6 552 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
TVP23A-205ENST00000572428 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 SPAG5Q96R06 1193 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 AGXT2Q9BYV1 514 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 TPCN1Q9ULQ1 816 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 SLC4A4Q9Y6R1 1079 aa9.9□□□□□ -0.82
TVP23A-205ENST00000572428 LARGE1O95461 756 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 PCP11498 1178 aaKnown RBP9.9□□□□□ -0.83
TVP23A-205ENST00000572428 GZMAP12544 262 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 CDR1P51861 262 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 CAVIN1Q6NZI2 390 aaKnown RBP9.9□□□□□ -0.83
TVP23A-205ENST00000572428 STOX1Q6ZVD7 989 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 TAOK1Q7L7X3 1001 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 CEP57L1Q8IYX8 460 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 LINC00469Q8N7U9 141 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 B4GALNT2Q8NHY0 566 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 PIBF1Q8WXW3 757 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 ZBED3Q96IU2 234 aaPredicted RBP9.9□□□□□ -0.83
TVP23A-205ENST00000572428 CRNKL1Q9BZJ0 848 aaKnown RBP9.9□□□□□ -0.83
TVP23A-205ENST00000572428 TAF6LQ9Y6J9 622 aa9.9□□□□□ -0.83
TVP23A-205ENST00000572428 SCN4AP35499 1836 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 SMTNL1A8MU46 457 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 PRKAB2O43741 272 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 KATNA1O75449 491 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 F13A1P00488 732 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 PCNAP12004 261 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 TRAPPC10P48553 1259 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 POLD2P49005 469 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 DIXDC1Q155Q3 683 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
TVP23A-205ENST00000572428 KIAA0753Q2KHM9 967 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 MAP7D1Q3KQU3 841 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 APOBEC3HQ6NTF7 200 aaKnown RBP9.89□□□□□ -0.83
TVP23A-205ENST00000572428 NACAP1Q9BZK3 213 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 DCP1AQ9NPI6 582 aaPredicted RBP9.89□□□□□ -0.83
TVP23A-205ENST00000572428 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
TVP23A-205ENST00000572428 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 E7EWF7 191 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 PSMD14O00487 310 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 PAHP00439 452 aa9.89□□□□□ -0.83
TVP23A-205ENST00000572428 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
TVP23A-205ENST00000572428 SKIV2L2P42285 1042 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms