RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 PRKAG2Q9UGJ0 569 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 TBX21Q9UL17 535 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 UMODL1Q5DID0 1318 aa11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-213ENST00000571886 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 SPATA31C2B4DYI2 1134 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 ATP9AO75110 1047 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 GGPS1O95749 300 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 IFNAR1P17181 557 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 ITGB5P18084 799 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 AK2P54819 239 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 C9orf50Q5SZB4 431 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 EMID1Q96A84 441 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 LBHD1Q9BQE6 289 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 TRMT13Q9NUP7 481 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
GTF3C1-213ENST00000571886 EDIL3O43854 480 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 LARGE1O95461 756 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 TIMP1P01033 207 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 ZNF286BP0CG31 522 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 TGFB3P10600 412 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 CYP2C9P11712 490 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 RAG1P15918 1043 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 ADCY7P51828 1080 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 ANAPC15P60006 121 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 SCRN1Q12765 414 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 HIC1Q14526 733 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 SHHQ15465 462 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 LRCH3Q96II8 777 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 ANO3Q9BYT9 981 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 PPP1R12CQ9BZL4 782 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
GTF3C1-213ENST00000571886 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 SPDYE3A6NKU9 549 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 FIBPO43427 364 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 KPNA6O60684 536 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 STAM2O75886 525 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 CTDNEP1O95476 244 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 HOXD8P13378 290 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 CYP2C18P33260 490 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 DGKDQ16760 1214 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 BRDTQ58F21 947 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 FAM47CQ5HY64 1035 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 RASGRP4Q8TDF6 673 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 C16orf70Q9BSU1 422 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 ZMYND12Q9H0C1 365 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 JADE2Q9NQC1 790 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
GTF3C1-213ENST00000571886 SCN5AQ14524 2016 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 hCG_1984214I3L0E3 225 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 HAS3O00219 553 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 TLR3O15455 904 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 ARP10275 920 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 KCNA2P16389 499 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 PSEN2P49810 448 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 CCL23P55773 120 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 ZNF200P98182 395 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 ZNF713Q8N859 430 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 VWCEQ96DN2 955 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 KIF2CQ99661 725 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 GPR20Q99678 358 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 MXRA8Q9BRK3 442 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 NOC4LQ9BVI4 516 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
GTF3C1-213ENST00000571886 PFKFB2O60825 505 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 PPFIA4O75335 1185 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 ACRP10323 421 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 CSF2RAP15509 400 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 SREBF1P36956 1147 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 NEK4P51957 841 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 SP4Q02446 784 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms