RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 USP17L5A8MUK1 530 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 TRAF5O00463 557 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 TLR2O60603 784 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 HEXIM1O94992 359 aaKnown RBP19.29■□□□□ 0.68
SCARF1-205ENST00000571272 GBP6Q6ZN66 633 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 CEP95Q96GE4 821 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 STK17AQ9UEE5 414 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 ZEB2O60315 1214 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 POLR2FP61218 127 aaKnown RBP19.28■□□□□ 0.68
SCARF1-205ENST00000571272 TRADDQ15628 312 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 CCDC40Q4G0X9 1142 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 ICE2Q659A1 982 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 CERS3Q8IU89 383 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 RUBCNQ92622 972 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 RAD54LQ92698 747 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 CAVIN3Q969G5 261 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCARF1-205ENST00000571272 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 SSBP05455 408 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCARF1-205ENST00000571272 NNTQ13423 1086 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 TMEM266Q2M3C6 531 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 SLC9C1Q4G0N8 1177 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 IFT20Q8IY31 132 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 TSG101Q99816 390 aa19.28■□□□□ 0.68
SCARF1-205ENST00000571272 KLRC1P26715 233 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 ECM1Q16610 540 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 FAM83BQ5T0W9 1011 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 KRT12Q99456 494 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 SSU72P8A0A1W2PR75 194 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 EDIL3O43854 480 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 NOL4O94818 638 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 CFAP58Q5T655 872 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 SFMBT2Q5VUG0 894 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 KRT79Q5XKE5 535 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 RNF10Q8N5U6 811 aaKnown RBP19.27■□□□□ 0.68
SCARF1-205ENST00000571272 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 TBC1D5Q92609 795 aa19.27■□□□□ 0.68
SCARF1-205ENST00000571272 LSM14BQ9BX40 385 aaKnown RBP19.27■□□□□ 0.68
SCARF1-205ENST00000571272 ERLIN2O94905 339 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 EPB41P11171 864 aaKnown RBP19.26■□□□□ 0.67
SCARF1-205ENST00000571272 EHHADHQ08426 723 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 NELFCDQ8IXH7 590 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 MYOCDQ8IZQ8 938 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 IPO4Q8TEX9 1081 aaKnown RBP19.26■□□□□ 0.67
SCARF1-205ENST00000571272 FGFBP2Q9BYJ0 223 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 NDUFAB1O14561 156 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 FXR2P51116 673 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARF1-205ENST00000571272 PPARDQ03181 441 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 PACSIN1Q9BY11 444 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 COL4A3BPQ9Y5P4 624 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 ABCB11O95342 1321 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 ZNF233A6NK53 670 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 TNNI2P48788 182 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 GTF2A1P52655 376 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-205ENST00000571272 FAM107BQ9H098 131 aa19.26■□□□□ 0.67
SCARF1-205ENST00000571272 BTDP43251 543 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 FKBP3Q00688 224 aaKnown RBP19.25■□□□□ 0.67
SCARF1-205ENST00000571272 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-205ENST00000571272 RAPGEF1Q13905 1077 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 KCTD19Q17RG1 926 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-205ENST00000571272 NEDD1Q8NHV4 660 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 KAT2BQ92831 832 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 GDF3Q9NR23 364 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 ADAMTS1Q9UHI8 967 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 TNFRSF8P28908 595 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 EIF6P56537 245 aaKnown RBP19.25■□□□□ 0.67
SCARF1-205ENST00000571272 COASYQ13057 564 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 GLE1Q53GS7 698 aaKnown RBP19.25■□□□□ 0.67
SCARF1-205ENST00000571272 IQCKQ8N0W5 287 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 CEP72Q9P209 647 aa19.25■□□□□ 0.67
SCARF1-205ENST00000571272 A0A087X0T9 212 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 CPP00450 1065 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 SERPING1P05155 500 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 FAM228BP0C875 321 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 PPP4CP60510 307 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 GSTO1P78417 241 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 SKOR1P84550 965 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 GUCY1A3Q02108 690 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 PTPROQ16827 1216 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 RNPC3Q96LT9 517 aaKnown RBP19.24■□□□□ 0.67
SCARF1-205ENST00000571272 RAB34Q9BZG1 259 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 NYXQ9GZU5 481 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 TSKSQ9UJT2 592 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 SPATA31A1Q5TZJ5 1347 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 IRS2Q9Y4H2 1338 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 SNED1Q8TER0 1413 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 TM4SF1P30408 202 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 ADCY7P51828 1080 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 PAK2Q13177 524 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 NFIXQ14938 502 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 UBE2SQ16763 222 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 KLHL7Q8IXQ5 586 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 CASKIN2Q8WXE0 1202 aa19.24■□□□□ 0.67
SCARF1-205ENST00000571272 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms