RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 PIBF1Q8WXW3 757 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 AP5M1Q9H0R1 490 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
UBFD1-210ENST00000571064 ST18O60284 1047 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 ICAM1P05362 532 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 CA3P07451 260 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 TMEM63BQ5T3F8 832 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 HOMER1Q86YM7 354 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 A1CFQ9NQ94 594 aaKnown RBP24.81■■□□□ 1.56
UBFD1-210ENST00000571064 PDGFCQ9NRA1 345 aa24.81■■□□□ 1.56
UBFD1-210ENST00000571064 CCDC196A0A1B0GTZ2 297 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 hCG_1642624A0A1W2PR95 340 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 EPOPA6NHQ4 379 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 ZBTB5O15062 677 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 GTPBP6O43824 516 aaPredicted RBP24.8■■□□□ 1.56
UBFD1-210ENST00000571064 POU3F3P20264 500 aaPredicted RBP24.8■■□□□ 1.56
UBFD1-210ENST00000571064 ACAD9Q9H845 621 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 HCN4Q9Y3Q4 1203 aa24.8■■□□□ 1.56
UBFD1-210ENST00000571064 ASB14A6NK59 587 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 ZEB2O60315 1214 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 DTNBO60941 627 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 EEPD1Q7L9B9 569 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 GTF3C6Q969F1 213 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 SEZ6LQ9BYH1 1024 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 CCPG1Q9ULG6 757 aa24.79■■□□□ 1.56
UBFD1-210ENST00000571064 PNMA6FA0A0J9YX94 578 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 PPFIA3O75145 1194 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 CTDNEP1O95476 244 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 DEFB128Q7Z7B8 93 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 PHKBQ93100 1093 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 RRP36Q96EU6 259 aaKnown RBP24.78■■□□□ 1.56
UBFD1-210ENST00000571064 RNF146Q9NTX7 359 aa24.78■■□□□ 1.56
UBFD1-210ENST00000571064 TRMT13Q9NUP7 481 aaKnown RBP24.78■■□□□ 1.56
UBFD1-210ENST00000571064 V9GY48 417 aaPredicted RBP24.78■■□□□ 1.56
UBFD1-210ENST00000571064 TLL1O43897 1013 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 CYP2C9P11712 490 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 ALAS1P13196 640 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 IFNAR1P17181 557 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 MUM1L1Q5H9M0 696 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 TAPT1Q6NXT6 567 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 FBXO11Q86XK2 927 aa24.77■■□□□ 1.56
UBFD1-210ENST00000571064 FBXO16Q8IX29 292 aaPredicted RBP24.77■■□□□ 1.56
UBFD1-210ENST00000571064 ARIH1Q9Y4X5 557 aaPredicted RBP24.77■■□□□ 1.56
UBFD1-210ENST00000571064 LRRC37A2A6NM11 1700 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 ARHGEF15O94989 841 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 USH1GQ495M9 461 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 TMEM31Q5JXX7 168 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 IQSEC1Q6DN90 963 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 CLEC4DQ8WXI8 215 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 KHSRPQ92945 711 aaKnown RBP eCLIP24.76■■□□□ 1.55
UBFD1-210ENST00000571064 ZSCAN31Q96LW9 406 aaPredicted RBP24.76■■□□□ 1.55
UBFD1-210ENST00000571064 COG5Q9UP83 839 aa24.76■■□□□ 1.55
UBFD1-210ENST00000571064 PFKMP08237 780 aa24.75■■□□□ 1.55
UBFD1-210ENST00000571064 TKFCQ3LXA3 575 aa24.75■■□□□ 1.55
UBFD1-210ENST00000571064 ARNTL2Q8WYA1 636 aa24.75■■□□□ 1.55
UBFD1-210ENST00000571064 TRERF1Q96PN7 1200 aa24.75■■□□□ 1.55
UBFD1-210ENST00000571064 AMNQ9BXJ7 453 aa24.75■■□□□ 1.55
UBFD1-210ENST00000571064 TRANK1O15050 2925 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 PRPF3O43395 683 aaKnown RBP24.74■■□□□ 1.55
UBFD1-210ENST00000571064 PKN1Q16512 942 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 CCDC83Q8IWF9 413 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 TMX3Q96JJ7 454 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 SLC26A6Q9BXS9 759 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 SH2B1Q9NRF2 756 aaPredicted RBP24.74■■□□□ 1.55
UBFD1-210ENST00000571064 Q9Y3F1 56 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 SCN5AQ14524 2016 aa24.74■■□□□ 1.55
UBFD1-210ENST00000571064 CPLX1O14810 134 aa24.73■■□□□ 1.55
UBFD1-210ENST00000571064 MCM2P49736 904 aa24.73■■□□□ 1.55
UBFD1-210ENST00000571064 TAP1Q03518 808 aa24.73■■□□□ 1.55
UBFD1-210ENST00000571064 PURBQ96QR8 312 aaKnown RBP24.73■■□□□ 1.55
UBFD1-210ENST00000571064 RNF26Q9BY78 433 aaPredicted RBP24.73■■□□□ 1.55
UBFD1-210ENST00000571064 C11orf16Q9NQ32 467 aa24.73■■□□□ 1.55
UBFD1-210ENST00000571064 PNMA2Q9UL42 364 aa24.73■■□□□ 1.55
UBFD1-210ENST00000571064 ABCB11O95342 1321 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 FAM86C2PA6NEL3 165 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 NFIBO00712 420 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 OPLAHO14841 1288 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 NSUN7Q8NE18 718 aaKnown RBP24.72■■□□□ 1.55
UBFD1-210ENST00000571064 GPKOWQ92917 476 aaPredicted RBP eCLIP24.72■■□□□ 1.556e-6■□□□□ 11.1
UBFD1-210ENST00000571064 HLA-CQ95604 372 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 SEC63Q9UGP8 760 aaKnown RBP24.72■■□□□ 1.55
UBFD1-210ENST00000571064 PCDHA1Q9Y5I3 950 aa24.72■■□□□ 1.55
UBFD1-210ENST00000571064 SUPT20HL2P0C7V6 817 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 PFKFB3Q16875 520 aaPredicted RBP24.71■■□□□ 1.55
UBFD1-210ENST00000571064 WWC2Q6AWC2 1192 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 SPRED2Q7Z698 418 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 PPP1R13LQ8WUF5 828 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 TBC1D5Q92609 795 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 SLC9A7Q96T83 725 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 CYP39A1Q9NYL5 469 aa24.71■■□□□ 1.55
UBFD1-210ENST00000571064 JAK2O60674 1132 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 ACTN1P12814 892 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 FDPSP14324 419 aaKnown RBP24.7■■□□□ 1.54
UBFD1-210ENST00000571064 SSRP1Q08945 709 aaKnown RBP24.7■■□□□ 1.54
UBFD1-210ENST00000571064 GRB10Q13322 594 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 TYW1BQ6NUM6 668 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 CPLX2Q6PUV4 134 aaKnown RBP24.7■■□□□ 1.54
UBFD1-210ENST00000571064 SNX21Q969T3 373 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 VTA1Q9NP79 307 aa24.7■■□□□ 1.54
UBFD1-210ENST00000571064 MYL3P08590 195 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms