RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 GRIK5Q16478 980 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 RUFY1Q96T51 708 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 STK17AQ9UEE5 414 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 APBA3O96018 575 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 CPP00450 1065 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 PIGSQ96S52 555 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 NLRC4Q9NPP4 1024 aa18.67■□□□□ 0.58
PCDHB19P-201ENST00000570871 IRS2Q9Y4H2 1338 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 NAP1L1P55209 391 aaKnown RBP18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 CALCRLQ16602 461 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 TDRD12Q587J7 1177 aaKnown RBP18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 ZIM3Q96PE6 472 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 SEC63Q9UGP8 760 aaKnown RBP18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 FAM169AQ9Y6X4 670 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 SSU72P8A0A1W2PR75 194 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 SLC37A4O43826 429 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 GLI1P08151 1106 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 RNF10Q8N5U6 811 aaKnown RBP18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 NUDT12Q9BQG2 462 aa18.66■□□□□ 0.58
PCDHB19P-201ENST00000570871 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 POTEMA6NI47 508 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 CARSP49589 748 aaKnown RBP18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 SKOR1P84550 965 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 CFAP221Q4G0U5 840 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 GLE1Q53GS7 698 aaKnown RBP18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 ICE2Q659A1 982 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 MICALL1Q8N3F8 863 aa18.65■□□□□ 0.58
PCDHB19P-201ENST00000570871 SHTN1A0MZ66 631 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 ZSCAN5CA6NGD5 496 aaPredicted RBP18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 RBAK-RBAKDNI3L0D1 243 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 ZPR1O75312 459 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 FAM153BP0C7A2 387 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 FXR2P51116 673 aaKnown RBP eCLIP18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 FAM153CQ494X1 144 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 SLC51AQ86UW1 340 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 SH2D3CQ8N5H7 860 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 IPO4Q8TEX9 1081 aaKnown RBP18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 RAD54LQ92698 747 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 DDX12PQ92771 950 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 EYA3Q99504 573 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 FAM153AQ9UHL3 310 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 NFU1Q9UMS0 254 aa18.64■□□□□ 0.58
PCDHB19P-201ENST00000570871 ESYT3A0FGR9 886 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 TLR2O60603 784 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 TDP2O95551 362 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 BAG3O95817 575 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 KRT14P02533 472 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 LIG3P49916 1009 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 DNA2P51530 1060 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 EHHADHQ08426 723 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 ORC2Q13416 577 aaPredicted RBP18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 NNTQ13423 1086 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 TRAPPC3LQ5T215 181 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 UBA5Q9GZZ9 404 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 GDF3Q9NR23 364 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
PCDHB19P-201ENST00000570871 EDIL3O43854 480 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 NOL4O94818 638 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 RFC4P35249 363 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 CDK8P49336 464 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 PDCLQ13371 301 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 KCTD16Q68DU8 428 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 IFT20Q8IY31 132 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 WDR66Q8TBY9 1149 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 SNX29Q8TEQ0 813 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 EPB41L5Q9HCM4 733 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 TSKSQ9UJT2 592 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 PALMO75781 387 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 HEXIM1O94992 359 aaKnown RBP18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 PPP4CP60510 307 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 TMEM266Q2M3C6 531 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 CCDC43Q96MW1 224 aaKnown RBP18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 TSG101Q99816 390 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 SAMM50Q9Y512 469 aa18.63■□□□□ 0.57
PCDHB19P-201ENST00000570871 FTCDO95954 541 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 GUCY2DQ02846 1103 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 SLC9C1Q4G0N8 1177 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 FAM83BQ5T0W9 1011 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 SFMBT2Q5VUG0 894 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 NBPF5PQ86XG9 351 aaPredicted RBP18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 IQCKQ8N0W5 287 aa18.62■□□□□ 0.57
PCDHB19P-201ENST00000570871 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms