RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 MAGOHP61326 146 aaKnown RBP10.93□□□□□ -0.66
USP43-203ENST00000570827 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 TTMPQ5BVD1 217 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 RUFY4Q6ZNE9 571 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 TBC1D1Q86TI0 1168 aaPredicted RBP10.93□□□□□ -0.66
USP43-203ENST00000570827 MICAL1Q8TDZ2 1067 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 MAGOHBQ96A72 148 aaKnown RBP10.93□□□□□ -0.66
USP43-203ENST00000570827 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 AGPSO00116 658 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 CSF1RP07333 972 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 ZNF76P36508 570 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 SNAP25P60880 206 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 TROAPQ12815 778 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
USP43-203ENST00000570827 RPAINQ86UA6 219 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 REXO1Q8N1G1 1221 aaKnown RBP10.93□□□□□ -0.66
USP43-203ENST00000570827 RETREG2Q8NC44 543 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 SAMD15Q9P1V8 674 aa10.93□□□□□ -0.66
USP43-203ENST00000570827 A0A1W2PQC6 194 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 DDAH1O94760 285 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 PRPF6O94906 941 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 IL6STP40189 918 aaPredicted RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 RPS8P62241 208 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 IL17AQ16552 155 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 NEK8Q86SG6 692 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 IRF2BP1Q8IU81 584 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 CREG2Q8IUH2 290 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 LRRC47Q8N1G4 583 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 MDM1Q8TC05 714 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 DNAJC7Q99615 494 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 TRIM9Q9C026 710 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 AMACRQ9UHK6 382 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 UTP11Q9Y3A2 253 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 PLTPP55058 493 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 NEDD9Q14511 834 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 ZKSCAN8Q15776 578 aaPredicted RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 ARHGAP44Q17R89 818 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 TBC1D10BQ4KMP7 808 aaPredicted RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 RPGRQ92834 1020 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP43-203ENST00000570827 CHUKO15111 745 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 DAPK3O43293 454 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 RAD51CO43502 376 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 KLRC1P26715 233 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 COPB2P35606 906 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 VPS41P49754 854 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 TEX11Q8IYF3 940 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 LARP4BQ92615 738 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 THOC1Q96FV9 657 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 ATP6V1G3Q96LB4 118 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 DNAJC17Q9NVM6 304 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
USP43-203ENST00000570827 PDS5AQ29RF7 1337 aaKnown RBP10.92□□□□□ -0.66
USP43-203ENST00000570827 KIF4AO95239 1232 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 NEFHP12036 1026 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 MDH1P40925 334 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 ADAM9Q13443 819 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 TBC1D9BQ66K14 1250 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 TTI2Q6NXR4 508 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 SH3RF1Q7Z6J0 888 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 PACSIN1Q9BY11 444 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 EPN3Q9H201 632 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 FBXL5Q9UKA1 691 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 SUFUQ9UMX1 484 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 A0A1B0GUA9 196 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 CETN3O15182 167 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 PDHBP11177 359 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 AARSP49588 968 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP43-203ENST00000570827 MECOMQ03112 1051 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 PIGSQ96S52 555 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 PKD2L1Q9P0L9 805 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 BCS1LQ9Y276 419 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 MEIS1O00470 390 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 SKAP2O75563 359 aaPredicted RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 UFL1O94874 794 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 SLC16A2P36021 539 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 ZNF211Q13398 564 aaPredicted RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 IFI16Q16666 785 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 CCDC38Q502W7 563 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 ARL6IP4Q66PJ3 421 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 TRIM68Q6AZZ1 485 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 DDX12PQ92771 950 aa10.91□□□□□ -0.66
USP43-203ENST00000570827 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 ELAC2Q9BQ52 826 aaKnown RBP10.91□□□□□ -0.66
USP43-203ENST00000570827 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms