RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 HIPK3Q9H422 1215 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 ZNF576Q9H609 170 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 VRTNQ9H8Y1 702 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 VTA1Q9NP79 307 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 CYP39A1Q9NYL5 469 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 DDX49Q9Y6V7 483 aaKnown RBP7.65□□□□□ -1.18
SMG6-204ENST00000570606 SCN10AQ9Y5Y9 1956 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 PTPDC1A2A3K4 754 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 GRXCR1A8MXD5 290 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 CTAGE5O15320 804 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 DYNC1LI2O43237 492 aaPredicted RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 ORC4O43929 436 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ICAM1P05362 532 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 SMPD1P17405 629 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 PTGS1P23219 599 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ITGA7Q13683 1181 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ELOAQ14241 798 aaKnown RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 RAB30Q15771 203 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ANKRD45Q5TZF3 282 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 VPS53Q5VIR6 699 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 SYDE2Q5VT97 1194 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 TRAF7Q6Q0C0 670 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 KIAA1211Q6ZU35 1233 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ZNF365Q70YC5 407 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 RNF135Q8IUD6 432 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 PLPP7Q8NBV4 271 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 EVI5LQ96CN4 794 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 C1QTNF2Q9BXJ5 285 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 PBX4Q9BYU1 374 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 RANBP17Q9H2T7 1088 aaKnown RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 IL23AQ9NPF7 189 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 INCENPQ9NQS7 918 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 IL17RBQ9NRM6 502 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 HCSTQ9UBK5 93 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 ADD3Q9UEY8 706 aaKnown RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 GNEQ9Y223 722 aaKnown RBP7.64□□□□□ -1.19
SMG6-204ENST00000570606 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
SMG6-204ENST00000570606 UMODL1Q5DID0 1318 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 RAD50Q92878 1312 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 SALL3Q9BXA9 1300 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 TRIP12Q14669 1992 aaPredicted RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 A0A0D9SFI3 127 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 NFIBO00712 420 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 FOXP2O15409 715 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 CD4P01730 458 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 TOP1P11387 765 aaKnown RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 SLC16A2P36021 539 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 ALDH5A1P51649 535 aaPredicted RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 CCL23P55773 120 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 RRP1P56182 461 aaKnown RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 HAND2P61296 217 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 PSMC6P62333 389 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 NKX3-2P78367 333 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 KCNC4Q03721 635 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 NCOA4Q13772 614 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 BAATQ14032 418 aaPredicted RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 IQSEC1Q6DN90 963 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 TTBK2Q6IQ55 1244 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 SLC30A10Q6XR72 485 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 USP38Q8NB14 1042 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 OR6J1Q8NGC5 347 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 PPM1EQ8WY54 764 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 FAM227BQ96M60 508 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 MPHOSPH6Q99547 160 aaKnown RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 NOC4LQ9BVI4 516 aaKnown RBP7.63□□□□□ -1.19
SMG6-204ENST00000570606 SEZ6LQ9BYH1 1024 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 PRDM12Q9H4Q4 367 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 PDGFCQ9NRA1 345 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 HELLSQ9NRZ9 838 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 ANAPC4Q9UJX5 808 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 ZMIZ1Q9ULJ6 1067 aa7.63□□□□□ -1.19
SMG6-204ENST00000570606 KIAA1217Q5T5P2 1943 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 PRRC2BQ5JSZ5 2229 aaKnown RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 ZMYM6O95789 1325 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 CCDC171Q6TFL3 1326 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 RNF223E7ERA6 249 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 LZTS3O60299 673 aaPredicted RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 B4GALT4O60513 344 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 FGBP02675 491 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 MYL3P08590 195 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 CALML3P27482 149 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 CPT1AP50416 773 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 PDE1AP54750 535 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 SH3BP2P78314 561 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 PPP2R5BQ15173 497 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 ALX1Q15699 326 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 DUSP28Q4G0W2 176 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 MCMDC2Q4G0Z9 681 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 BRDTQ58F21 947 aaPredicted RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 FAM47CQ5HY64 1035 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 PLA2G2CQ5R387 149 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 RASIP1Q5U651 963 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 TAPT1Q6NXT6 567 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 C16orf59Q7L2K0 433 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 OTOP2Q7RTS6 562 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms