RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 SETQ01105 290 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 GHRHRQ02643 423 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 CEBPZQ03701 1054 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 DNM1Q05193 864 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 ORC2Q13416 577 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 BAATQ14032 418 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 ARHGEF6Q15052 776 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 STK38Q15208 465 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 NPY5RQ15761 445 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 TMEM132AQ24JP5 1023 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 GNPTABQ3T906 1256 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 DPP9Q86TI2 863 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 ABRAQ8N0Z2 381 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 JMYQ8N9B5 988 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 DNERQ8NFT8 737 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 NSUN6Q8TEA1 469 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 TNFRSF25Q93038 417 aa7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 SEPT9Q9UHD8 586 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-204ENST00000570484 GOLGA6L4A6NEF3 574 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 SLC15A5A6NIM6 579 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 DDX11L8A8MPP1 907 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 M0R2N6 131 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 TBC1D8O95759 1140 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 PGK2P07205 417 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 MYCLP12524 364 aaPredicted RBP7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 ADORA2AP29274 412 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 MCM7P33993 719 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 RGS2P41220 211 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 UBXN2AP68543 259 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 LACTBP83111 547 aaPredicted RBP7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 SP3Q02447 781 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 MMRN1Q13201 1228 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 TMEM266Q2M3C6 531 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 Q3C1V9 767 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 XRRA1Q6P2D8 792 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 FAM173BQ6P4H8 233 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 C17orf99Q6UX52 265 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 KCNG4Q8TDN1 519 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 ZFRQ96KR1 1074 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 APBA2Q99767 749 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 PXMP2Q9NR77 195 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 RNF186Q9NXI6 227 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 DDX25Q9UHL0 483 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 ZDHHC9Q9Y397 364 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 RPTORQ8N122 1335 aa7.47□□□□□ -1.21
CTDNEP1-204ENST00000570484 PARP14Q460N5 1801 aa7.46□□□□□ -1.21
CTDNEP1-204ENST00000570484 ASB14A6NK59 587 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 LAD1O00515 517 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 STAM2O75886 525 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 BAG4O95429 457 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 YEATS4O95619 227 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 OR52Z1P0C646 297 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PTMSP20962 102 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 HOXD10P28358 340 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PSMC4P43686 418 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 ME1P48163 572 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 ALDH5A1P51649 535 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 USP11P51784 963 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 GRB14Q14449 540 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PGM5Q15124 567 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 STXBP2Q15833 593 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 CALCRLQ16602 461 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PRR16Q569H4 304 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 EARS2Q5JPH6 523 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 ANO1Q5XXA6 986 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 MOXD1Q6UVY6 613 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 NLRX1Q86UT6 975 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 TBC1D5Q92609 795 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 ERO1AQ96HE7 468 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 TAAR1Q96RJ0 339 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 USP28Q96RU2 1077 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 IWS1Q96ST2 819 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 PDCD2LQ9BRP1 358 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 RAB34Q9BZG1 259 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM117AQ9C073 453 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 COL20A1Q9P218 1284 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 CNPY2Q9Y2B0 182 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
CTDNEP1-204ENST00000570484 LOC102724159A0A0B4J2E5 919 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 GPR25O00155 361 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 ADAMTS3O15072 1205 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 SPTLC2O15270 562 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 FKTNO75072 461 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 TDP2O95551 362 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 NR3C2P08235 984 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 CD46P15529 392 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 TXLNAP40222 546 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms