RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 RSPH10B2B2RC85 870 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 GRM6O15303 877 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 RNF113AO15541 343 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 LINC01565O15544 149 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 RSPH10BP0C881 870 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 NOVP48745 357 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 PPARAQ07869 468 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 MFSD10Q14728 455 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 DGKDQ16760 1214 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 SEPT14Q6ZU15 432 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 CD207Q9UJ71 328 aa12.32□□□□□ -0.44
CTDNEP1-202ENST00000570380 VPS13AQ96RL7 3174 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 B4DLN1 442 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 C5orf67F2Z3F1 127 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 HMMRO75330 724 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 F2P00734 622 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 CTNNB1P35222 781 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 THPOP40225 353 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 MRPL12P52815 198 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 MSLNLQ96KJ4 702 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 KATNAL1Q9BW62 490 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 LMAN2LQ9H0V9 348 aa12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
CTDNEP1-202ENST00000570380 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 MYO10Q9HD67 2058 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 EYA4O95677 639 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 RB1P06400 928 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 AVPR2P30518 371 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 SIGLEC14Q08ET2 396 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 ADAM15Q13444 863 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 ASCL5Q7RTU5 278 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 SERINC5Q86VE9 423 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 DHX37Q8IY37 1157 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 SEPT8Q92599 483 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 GPCPD1Q9NPB8 672 aa12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-202ENST00000570380 TTC3P53804 2025 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 H0Y858 1186 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 BMPR1AP36894 532 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 ERMP1Q7Z2K6 904 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 FIBCD1Q8N539 461 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 TBC1D5Q92609 795 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 EMID1Q96A84 441 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 ASIC4Q96FT7 647 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 TAAR1Q96RJ0 339 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 C11orf84Q9BUA3 381 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 NAPBQ9H115 298 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 TLR9Q9NR96 1032 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 CLEC1BQ9P126 229 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 PLXNA4Q9HCM2 1894 aa12.29□□□□□ -0.44
CTDNEP1-202ENST00000570380 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 CSPG5O95196 566 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 HOXD8P13378 290 aaPredicted RBP12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 NDUFV1P49821 464 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 CAMK1Q14012 370 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 PPTC7Q8NI37 304 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 PNMA2Q9UL42 364 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 WDR19Q8NEZ3 1342 aa12.28□□□□□ -0.44
CTDNEP1-202ENST00000570380 PRR23AA6NEV1 266 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 MMP1P03956 469 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 COASYQ13057 564 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 LAMC2Q13753 1193 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 STXBP2Q15833 593 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 USH1GQ495M9 461 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 SMRP1Q8NCR6 262 aa12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 SYTL5Q8TDW5 730 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 NSUN6Q8TEA1 469 aaKnown RBP12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 CLP1Q92989 425 aaKnown RBP12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 RC3H2Q9HBD1 1191 aaKnown RBP12.27□□□□□ -0.45
CTDNEP1-202ENST00000570380 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms