RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ZBTB43O43298 467 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 SOX9P48436 509 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 GPSM2P81274 684 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 CHRNDQ07001 517 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 SYNE3Q6ZMZ3 975 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ZBTB33Q86T24 672 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 RNF180Q86T96 592 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 RAB11FIP4Q86YS3 637 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 FMR1NBQ8N0W7 255 aaPredicted RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 LY9Q9HBG7 655 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 DENND2AQ9ULE3 1009 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 BCL9LQ86UU0 1499 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 LTBP4Q8N2S1 1624 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 GSG1L2A8MUP6 293 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 VSTM5A8MXK1 200 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 FANCGO15287 622 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 KIF1CO43896 1103 aaKnown RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 POLR3DP05423 398 aaPredicted RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 BCAMP50895 628 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 NEK2P51955 445 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 CORO7P57737 925 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ETF1P62495 437 aaKnown RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 ZNF296Q8WUU4 475 aaPredicted RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 NGLY1Q96IV0 654 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ARMT1Q9H993 441 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ANO10Q9NW15 660 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 CLIC4Q9Y696 253 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 SNAP23O00161 211 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 SPTLC2O15270 562 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 RNASEH2AO75792 299 aaKnown RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 EPHA4P54764 986 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 TMEM67Q5HYA8 995 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 AKNAD1Q5T1N1 836 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ARMC3Q5W041 872 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 TRIM65Q6PJ69 517 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 GPR161Q8N6U8 529 aaKnown RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 RELTQ969Z4 430 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 DNAI1Q9UI46 699 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 FOXD3Q9UJU5 478 aaPredicted RBP8.98□□□□□ -0.97
TCF4-246ENST00000570287 HCN4Q9Y3Q4 1203 aa8.98□□□□□ -0.97
TCF4-246ENST00000570287 NID2Q14112 1375 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 STK36Q9NRP7 1315 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 KIF28PB7ZC32 967 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 SEC31AO94979 1220 aaKnown RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 F2P00734 622 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 PLCG2P16885 1265 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 NFXL1Q6ZNB6 911 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 C11orf57Q6ZUT1 292 aaPredicted RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 RSRC2Q7L4I2 434 aaKnown RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 CCDC150Q8NCX0 1101 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 PARD3BQ8TEW8 1205 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 CHAC2Q8WUX2 184 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 PLD4Q96BZ4 506 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 HOOK2Q96ED9 719 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 GOLGA8AA7E2F4 631 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 GOLGA6L19H0YKK7 550 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 TIMM44O43615 452 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 RASGRP1O95267 797 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 EIF4A3P38919 411 aaKnown RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 CD151P48509 253 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 SCNN1DP51172 638 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 SF3B3Q15393 1217 aaKnown RBP8.97□□□□□ -0.97
TCF4-246ENST00000570287 TCEA2Q15560 299 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 NTRK3Q16288 839 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 TM4SF20Q53R12 229 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 MFSD6Q6ZSS7 791 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 MICU3Q86XE3 530 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 LCORLQ8N3X6 602 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 PARP3Q9Y6F1 533 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 SLC4A4Q9Y6R1 1079 aa8.97□□□□□ -0.97
TCF4-246ENST00000570287 ZNF804BA4D1E1 1349 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 EIF3CLB5ME19 914 aaKnown RBP8.96□□□□□ -0.97
TCF4-246ENST00000570287 IFIT3O14879 490 aaKnown RBP8.96□□□□□ -0.97
TCF4-246ENST00000570287 IARSP41252 1262 aaKnown RBP8.96□□□□□ -0.97
TCF4-246ENST00000570287 TDO2P48775 406 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 RPAINQ86UA6 219 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 ANKRD18AQ8IVF6 992 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 EIF3CQ99613 913 aaKnown RBP8.96□□□□□ -0.97
TCF4-246ENST00000570287 YIPF4Q9BSR8 244 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 RNF41Q9H4P4 317 aaPredicted RBP8.96□□□□□ -0.97
TCF4-246ENST00000570287 SENP2Q9HC62 589 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 GJB4Q9NTQ9 266 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 LRP2BPQ9P2M1 347 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 FAM50BQ9Y247 325 aa8.96□□□□□ -0.97
TCF4-246ENST00000570287 A0A1B0GUL6 1792 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 H3BQF6 201 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 hCG_1984214I3L0E3 225 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 NDUFA8P51970 172 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 SART3Q15020 963 aaKnown RBP8.96□□□□□ -0.98
TCF4-246ENST00000570287 SLC39A14Q15043 492 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 MLC1Q15049 377 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 KRT40Q6A162 431 aa8.96□□□□□ -0.98
TCF4-246ENST00000570287 ALKBH2Q6NS38 261 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms