RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	FAM178B	Q8IXR5	827 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	GJD3	Q8N144	294 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	FBXO22	Q8NEZ5	403 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	DBF4B	Q8NFT6	615 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	EMID1	Q96A84	441 aa	Predicted RBP	12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	KAT14	Q9H8E8	782 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	PXMP2	Q9NR77	195 aa		12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	MRPL11	Q9Y3B7	192 aa	Known RBP	12.85	□□□□□ -0.35
CMC2-223	ENST00000570195	ZNF213	O14771	459 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	LGR5	O75473	907 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	MYCL	P12524	364 aa	Predicted RBP	12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	SSTR3	P32745	418 aa	Predicted RBP	12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	LEXM	Q3ZCV2	418 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	IQCA1	Q86XH1	822 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	MYOCD	Q8IZQ8	938 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	PPTC7	Q8NI37	304 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	RILPL2	Q969X0	211 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	MAF1	Q9H063	256 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	JMJD4	Q9H9V9	463 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	INSL6	Q9Y581	213 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195	KIAA1217	Q5T5P2	1943 aa		12.84	□□□□□ -0.35
CMC2-223	ENST00000570195		B4E1Z4	1266 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	RGS20	O76081	388 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	AMH	P03971	560 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	THPO	P40225	353 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	HSDL1	Q3SXM5	330 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	ASPRV1	Q53RT3	343 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	ZFP91	Q96JP5	570 aa	Predicted RBP	12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	SPATA33	Q96N06	139 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	MUC6	Q6W4X9	2439 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	SI	P14410	1827 aa		12.83	□□□□□ -0.36
CMC2-223	ENST00000570195	RSPH10B2	B2RC85	870 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195		H3BQ06	376 aa	Predicted RBP	12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	OPLAH	O14841	1288 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	GGPS1	O95749	300 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	PARP1	P09874	1014 aa	Known RBP	12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	RSPH10B	P0C881	870 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	HTRA4	P83105	476 aa	Predicted RBP	12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	CCDC178	Q5BJE1	867 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	MYSM1	Q5VVJ2	828 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	ENAH	Q8N8S7	591 aa	Predicted RBP	12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	ANKS1A	Q92625	1134 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	UIMC1	Q96RL1	719 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	PDCD2L	Q9BRP1	358 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	AMN	Q9BXJ7	453 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	EMSY	Q7Z589	1322 aa		12.82	□□□□□ -0.36
CMC2-223	ENST00000570195	PRR33	A8MZF0	331 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	PPFIA4	O75335	1185 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	HOXD8	P13378	290 aa	Predicted RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	SDS	P20132	328 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	HOXA13	P31271	388 aa	Predicted RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	HSD17B4	P51659	736 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	MFAP1	P55081	439 aa	Known RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	SP2	Q02086	613 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	MKRN4P	Q13434	485 aa	Predicted RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	EPC2	Q52LR7	807 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	CELF3	Q5SZQ8	465 aa	Known RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	EP400NL	Q6ZTU2	488 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	SERINC5	Q86VE9	423 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	STAG2	Q8N3U4	1231 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	IL31RA	Q8NI17	732 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	SP7	Q8TDD2	431 aa	Predicted RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.81	□□□□□ -0.36	4e-7	■■■■■ 40.8
CMC2-223	ENST00000570195	MRPL38	Q96DV4	380 aa	Known RBP	12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	C16orf70	Q9BSU1	422 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	OSBPL7	Q9BZF2	842 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	LNPK	Q9C0E8	428 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	ZSWIM5	Q9P217	1185 aa		12.81	□□□□□ -0.36
CMC2-223	ENST00000570195	MYH7B	A7E2Y1	1941 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	C17orf102	A2RUQ5	167 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	GRXCR2	A6NFK2	248 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	TREH	O43280	583 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	PPP1R11	O60927	126 aa	Predicted RBP	12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	UPP2	O95045	317 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	CTSH	P09668	335 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	UBA1	P22314	1058 aa	Known RBP	12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	GPM6B	Q13491	265 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	PGM5	Q15124	567 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	PTPRO	Q16827	1216 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	PLEKHG4	Q58EX7	1191 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	ALYREF	Q86V81	257 aa	Known RBP	12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	VSIG10L	Q86VR7	867 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	TICAM2	Q86XR7	235 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	NEK9	Q8TD19	979 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	ATP6V0A1	Q93050	837 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	YME1L1	Q96TA2	773 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	BCAS3	Q9H6U6	928 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	MLXIP	Q9HAP2	919 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	CTNNA3	Q9UI47	895 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	PIEZO1	Q92508	2521 aa		12.8	□□□□□ -0.36
CMC2-223	ENST00000570195	SMIM10L2A	P0DMW4	78 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	SMIM10L2B	P0DMW5	78 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	GHRHR	Q02643	423 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	TIGD5	Q53EQ6	642 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	TCEAL5	Q5H9L2	206 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	KCNV1	Q6PIU1	500 aa		12.79	□□□□□ -0.36
CMC2-223	ENST00000570195	CWC27	Q6UX04	472 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms