RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RTEL1Q9NZ71 1219 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 SPDYE3A6NKU9 549 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 SPATA31C2B4DYI2 1134 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 FIBPO43427 364 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 SORBS3O60504 671 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 HOXD8P13378 290 aaPredicted RBP14.96□□□□□ -0.01
CNOT1-220ENST00000569916 SCG2P13521 617 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 ADCY7P51828 1080 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PKN1Q16512 942 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 DGKDQ16760 1214 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 NBPF20Q3BBV1 942 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 LRIT3Q3SXY7 679 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 TEX2Q8IWB9 1127 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PPP1R13LQ8WUF5 828 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 KAT2BQ92831 832 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PPP1R12CQ9BZL4 782 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 NCOA5Q9HCD5 579 aaKnown RBP14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PCDHA6Q9UN73 950 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PCDHA8Q9Y5H6 950 aa14.96□□□□□ -0.01
CNOT1-220ENST00000569916 PRPF3O43395 683 aaKnown RBP14.95□□□□□ -0.02
CNOT1-220ENST00000569916 IFNAR1P17181 557 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 CLK2P49760 499 aaKnown RBP14.95□□□□□ -0.02
CNOT1-220ENST00000569916 EPHB4P54760 987 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 ANAPC15P60006 121 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
CNOT1-220ENST00000569916 FPGSQ05932 587 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 HSDL1Q3SXM5 330 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 MFSD5Q6N075 450 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 PHKBQ93100 1093 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 SPATA33Q96N06 139 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 RNF26Q9BY78 433 aaPredicted RBP14.95□□□□□ -0.02
CNOT1-220ENST00000569916 BCAS3Q9H6U6 928 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 PDRG1Q9NUG6 133 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 TRMT13Q9NUP7 481 aaKnown RBP14.95□□□□□ -0.02
CNOT1-220ENST00000569916 LAMA3Q16787 3333 aa14.95□□□□□ -0.02
CNOT1-220ENST00000569916 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 SCN5AQ14524 2016 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 SMCO2A6NFE2 343 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 F2P00734 622 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 ITGB5P18084 799 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 PTPN11Q06124 597 aaPredicted RBP14.94□□□□□ -0.02
CNOT1-220ENST00000569916 SHHQ15465 462 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 GPRASP2Q96D09 838 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 ZNF274Q96GC6 653 aaPredicted RBP14.94□□□□□ -0.02
CNOT1-220ENST00000569916 LARP6Q9BRS8 491 aaKnown RBP14.94□□□□□ -0.02
CNOT1-220ENST00000569916 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 HIPK3Q9H422 1215 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 UBIAD1Q9Y5Z9 338 aa14.94□□□□□ -0.02
CNOT1-220ENST00000569916 ESYT2A0FGR8 921 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 HAS3O00219 553 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 SEC24BO95487 1268 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 CYP2C18P33260 490 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 AP3B2Q13367 1082 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 NEDD9Q14511 834 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 NLRX1Q86UT6 975 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 SESTD1Q86VW0 696 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 PGBD1Q96JS3 809 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 NOC4LQ9BVI4 516 aaKnown RBP14.93□□□□□ -0.02
CNOT1-220ENST00000569916 SLC26A6Q9BXS9 759 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 ZMYND12Q9H0C1 365 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 EHMT1Q9H9B1 1298 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 TMEM260Q9NX78 707 aa14.93□□□□□ -0.02
CNOT1-220ENST00000569916 ADAMTS3O15072 1205 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
CNOT1-220ENST00000569916 PPFIA4O75335 1185 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 FOSP01100 380 aaPredicted RBP14.92□□□□□ -0.02
CNOT1-220ENST00000569916 SUPT20HL2P0C7V6 817 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 CYP2C9P11712 490 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 CSF2RAP15509 400 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 KCNA2P16389 499 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 PSEN2P49810 448 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 CHMP4BP1P59074 171 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 PPIGQ13427 754 aaKnown RBP eCLIP14.92□□□□□ -0.02
CNOT1-220ENST00000569916 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 TMEM199Q8N511 208 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 SENP7Q9BQF6 1050 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 C16orf70Q9BSU1 422 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 KATNAL1Q9BW62 490 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 TELO2Q9Y4R8 837 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 TRIP12Q14669 1992 aaPredicted RBP14.92□□□□□ -0.02
CNOT1-220ENST00000569916 SZT2Q5T011 3432 aa14.92□□□□□ -0.02
CNOT1-220ENST00000569916 ATP9AO75110 1047 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 SREBF1P36956 1147 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 AKAP17AQ02040 695 aaKnown RBP14.91□□□□□ -0.02
CNOT1-220ENST00000569916 STK3Q13188 491 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 MTMR1Q13613 665 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 MFSD10Q14728 455 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 KIAA0753Q2KHM9 967 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 GDF6Q6KF10 455 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms