RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SPATC1Q76KD6 591 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.86
CCDC113-205ENST00000569374 PHACTR4Q8IZ21 702 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 RNF214Q8ND24 703 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 TAF1DQ9H5J8 278 aaPredicted RBP9.71□□□□□ -0.86
CCDC113-205ENST00000569374 DBF4Q9UBU7 674 aaPredicted RBP9.71□□□□□ -0.86
CCDC113-205ENST00000569374 ZNF214Q9UL59 606 aaPredicted RBP9.71□□□□□ -0.86
CCDC113-205ENST00000569374 SH3TC1Q8TE82 1336 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 THSD7BQ9C0I4 1608 aa9.71□□□□□ -0.86
CCDC113-205ENST00000569374 MEGF11A6BM72 1044 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 CHURC1-FNTBB4DL54 471 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 LCE2BO14633 110 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 DNAJA2O60884 412 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 IGKV5-2P06315 115 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 HOXB7P09629 217 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 ZNF143P52747 638 aaPredicted RBP9.7□□□□□ -0.86
CCDC113-205ENST00000569374 GNAI1P63096 354 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 SQSTM1Q13501 440 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 DLK2Q6UY11 383 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 RBM17Q96I25 401 aaKnown RBP9.7□□□□□ -0.86
CCDC113-205ENST00000569374 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 PSMD1Q99460 953 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 RNF208Q9H0X6 261 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 KANSL2Q9H9L4 492 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 CRIM1Q9NZV1 1036 aa9.7□□□□□ -0.86
CCDC113-205ENST00000569374 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 SHISA8B8ZZ34 492 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 PIK3R2O00459 728 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 TMPRSS2O15393 492 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 SUSD5O60279 629 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
CCDC113-205ENST00000569374 DLGAP3O95886 979 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 EPS15P42566 896 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 FSTL1Q12841 308 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 MRM1Q6IN84 353 aaKnown RBP9.69□□□□□ -0.86
CCDC113-205ENST00000569374 SGSM3Q96HU1 749 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 GPATCH3Q96I76 525 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 TMPRSS13Q9BYE2 586 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 LEMD3Q9Y2U8 911 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
CCDC113-205ENST00000569374 RTL9Q8NET4 1388 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 PASKQ96RG2 1323 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 CCDC163A0A0D9SF12 145 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 IRS4O14654 1257 aaPredicted RBP9.68□□□□□ -0.86
CCDC113-205ENST00000569374 GYS2P54840 703 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 GPSM2P81274 684 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 KRT76Q01546 638 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 GRAPQ13588 217 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 TMEM67Q5HYA8 995 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 RTKN2Q8IZC4 609 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 GRAPLQ8TC17 118 aaPredicted RBP9.68□□□□□ -0.86
CCDC113-205ENST00000569374 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 CCDC74BQ96LY2 380 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 SPATA9Q9BWV2 254 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 SUGCTQ9HAC7 445 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 HYPKQ9NX55 129 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 KCNK4Q9NYG8 393 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 TJP2Q9UDY2 1190 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 AP4E1Q9UPM8 1137 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 PLAAQ9Y263 795 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
CCDC113-205ENST00000569374 PI4KAP2A4QPH2 592 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 FAM86C2PA6NEL3 165 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 TRAF5O00463 557 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 RGS13O14921 159 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 GBP1P32455 592 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 EPHX2P34913 555 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 DGKGP49619 791 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 COL9A3Q14050 684 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-205ENST00000569374 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-205ENST00000569374 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 CENPQQ7L2Z9 268 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-205ENST00000569374 PI4KAP1Q8N8J0 262 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC113-205ENST00000569374 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 POLLQ9UGP5 575 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 PPP1R9AQ9ULJ8 1098 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 PCDHB10Q9UN67 800 aa9.67□□□□□ -0.86
CCDC113-205ENST00000569374 DLL1O00548 723 aa9.66□□□□□ -0.86
CCDC113-205ENST00000569374 RAD17O75943 681 aa9.66□□□□□ -0.86
CCDC113-205ENST00000569374 PMS1P54277 932 aaKnown RBP9.66□□□□□ -0.86
CCDC113-205ENST00000569374 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
CCDC113-205ENST00000569374 CXCL9Q07325 125 aa9.66□□□□□ -0.86
CCDC113-205ENST00000569374 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms