RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 PCNX4Q63HM2 1172 aa23.17■■□□□ 1.3
ABCA3-206ENST00000569062 TYW1BQ6NUM6 668 aa23.17■■□□□ 1.3
ABCA3-206ENST00000569062 INPP4AQ96PE3 977 aaPredicted RBP23.17■■□□□ 1.3
ABCA3-206ENST00000569062 V9GY48 417 aaPredicted RBP23.17■■□□□ 1.3
ABCA3-206ENST00000569062 STAM2O75886 525 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 SUPT20HL2P0C7V6 817 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 ICAM3P32942 547 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 ADD1P35611 737 aaKnown RBP23.16■■□□□ 1.3
ABCA3-206ENST00000569062 METAP2P50579 478 aaKnown RBP eCLIP23.16■■□□□ 1.3
ABCA3-206ENST00000569062 RCAN1P53805 252 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 PTPN11Q06124 597 aaPredicted RBP23.16■■□□□ 1.3
ABCA3-206ENST00000569062 SEMA3FQ13275 785 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 GNPTABQ3T906 1256 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 TMEM240Q5SV17 173 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 SPATA33Q96N06 139 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 USP26Q9BXU7 913 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 SCN5AQ14524 2016 aa23.16■■□□□ 1.3
ABCA3-206ENST00000569062 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 EPB41L2O43491 1005 aaKnown RBP23.15■■□□□ 1.3
ABCA3-206ENST00000569062 ZNF286BP0CG31 522 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 PSMA5P28066 241 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 SCLYQ96I15 445 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 AGXT2Q9BYV1 514 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 MLXIPQ9HAP2 919 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 IL23AQ9NPF7 189 aa23.15■■□□□ 1.3
ABCA3-206ENST00000569062 HOXD8P13378 290 aaPredicted RBP23.14■■□□□ 1.29
ABCA3-206ENST00000569062 PSEN2P49810 448 aa23.14■■□□□ 1.29
ABCA3-206ENST00000569062 NAPAP54920 295 aa23.14■■□□□ 1.29
ABCA3-206ENST00000569062 ZNF365Q70YC5 407 aa23.14■■□□□ 1.29
ABCA3-206ENST00000569062 FBXL16Q8N461 479 aa23.14■■□□□ 1.29
ABCA3-206ENST00000569062 ALG1Q9BT22 464 aa23.14■■□□□ 1.29
ABCA3-206ENST00000569062 TRIP12Q14669 1992 aaPredicted RBP23.14■■□□□ 1.29
ABCA3-206ENST00000569062 TANC1Q9C0D5 1861 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 FIBPO43427 364 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 PPFIA4O75335 1185 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 F2P00734 622 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 GDF6Q6KF10 455 aaPredicted RBP23.13■■□□□ 1.29
ABCA3-206ENST00000569062 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 SESTD1Q86VW0 696 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 PCDHA6Q9UN73 950 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 PCDHA8Q9Y5H6 950 aa23.13■■□□□ 1.29
ABCA3-206ENST00000569062 SPDYE3A6NKU9 549 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 STXBP3O00186 592 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 HAS3O00219 553 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 SMAD3P84022 425 aaKnown RBP23.12■■□□□ 1.29
ABCA3-206ENST00000569062 MFSD10Q14728 455 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 PTGISQ16647 500 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 KIAA0753Q2KHM9 967 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 PSRC1Q6PGN9 363 aaPredicted RBP23.12■■□□□ 1.29
ABCA3-206ENST00000569062 RUFY3Q7L099 469 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 CYFIP1Q7L576 1253 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 VWCEQ96DN2 955 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 KATNAL1Q9BW62 490 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 ZSWIM6Q9HCJ5 1215 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 RIC8AQ9NPQ8 531 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 MTMR10Q9NXD2 777 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 HDAC6Q9UBN7 1215 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 NID2Q14112 1375 aa23.12■■□□□ 1.29
ABCA3-206ENST00000569062 NEDD9Q14511 834 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 PPP1R18Q6NYC8 613 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 C16orf70Q9BSU1 422 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 BARHL2Q9NY43 387 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 GTF2IRD1Q9UHL9 959 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 NOD1Q9Y239 953 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 TELO2Q9Y4R8 837 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 COL6A3P12111 3177 aa23.11■■□□□ 1.29
ABCA3-206ENST00000569062 CCDC196A0A1B0GTZ2 297 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 SMCO2A6NFE2 343 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 hCG_1984214I3L0E3 225 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 ITGB5P18084 799 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 RASIP1Q5U651 963 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 FAM109BQ6ICB4 259 aaPredicted RBP23.1■■□□□ 1.29
ABCA3-206ENST00000569062 METTL7BQ6UX53 244 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 NLRX1Q86UT6 975 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 ZNF713Q8N859 430 aaPredicted RBP23.1■■□□□ 1.29
ABCA3-206ENST00000569062 C7orf31Q8N865 590 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 PGBD1Q96JS3 809 aa23.1■■□□□ 1.29
ABCA3-206ENST00000569062 NOP56O00567 594 aaKnown RBP23.09■■□□□ 1.29
ABCA3-206ENST00000569062 ATP9AO75110 1047 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 FGBP02675 491 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 ADCY7P51828 1080 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 TOB2Q14106 344 aaPredicted RBP23.09■■□□□ 1.29
ABCA3-206ENST00000569062 PFKFB3Q16875 520 aaPredicted RBP23.09■■□□□ 1.29
ABCA3-206ENST00000569062 ZNF697Q5TEC3 545 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 GPRASP2Q96D09 838 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 SENP7Q9BQF6 1050 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 UBIAD1Q9Y5Z9 338 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 CDH23Q9H251 3354 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 GBF1Q92538 1859 aa23.09■■□□□ 1.29
ABCA3-206ENST00000569062 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.08■■□□□ 1.29
ABCA3-206ENST00000569062 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.08■■□□□ 1.29
ABCA3-206ENST00000569062 PITPNM1O00562 1244 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 PPFIA3O75145 1194 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 LGALS2P05162 132 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 PDIA3P30101 505 aaKnown RBP23.08■■□□□ 1.29
ABCA3-206ENST00000569062 CCT2P78371 535 aaKnown RBP23.08■■□□□ 1.29
ABCA3-206ENST00000569062 OTOP2Q7RTS6 562 aa23.08■■□□□ 1.29
ABCA3-206ENST00000569062 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms