RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 SIGLEC10Q96LC7 697 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 DRC1Q96MC2 740 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 BIVM-ERCC5R4GMW8 1640 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 ADAMTS20P59510 1910 aa5.03□□□□□ -1.6
HMGB1P6-201ENST00000569046 RUSC2Q8N2Y8 1516 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 MYO1BO43795 1136 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 ASGR2P07307 311 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 C6orf222P0C671 652 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 PMLP29590 882 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 LIMS1P48059 325 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 GTF2A2P52657 109 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 IFRD2Q12894 506 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 RIOX2Q8IUF8 465 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 LILRB2Q8N423 598 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 DCAF4Q8WV16 495 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 ALG3Q92685 438 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 IRF2BPLQ9H1B7 796 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 CLDND1Q9NY35 253 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 TRAF6Q9Y4K3 522 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 IRAK3Q9Y616 596 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 FHAD1B1AJZ9 1412 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 MAPKBP1O60336 1514 aa5.02□□□□□ -1.61
HMGB1P6-201ENST00000569046 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 H7BY64 318 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 MROH9Q5TGP6 573 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 STYK1Q6J9G0 422 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 LCNL1Q6ZST4 164 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 FAM129CQ86XR2 697 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 DCP2Q8IU60 420 aaKnown RBP5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 SCUBE1Q8IWY4 988 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 JMYQ8N9B5 988 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 TOX2Q96NM4 488 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 CDC6Q99741 560 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 SYT3Q9BQG1 590 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 JAM3Q9BX67 310 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 LNPKQ9C0E8 428 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 NUDT5Q9UKK9 219 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 PALD1Q9ULE6 856 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 TOP2BQ02880 1626 aa5.01□□□□□ -1.61
HMGB1P6-201ENST00000569046 WRNQ14191 1432 aaPredicted RBP eCLIP5□□□□□ -1.61
HMGB1P6-201ENST00000569046 NUAK1O60285 661 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZBTB7AO95365 584 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 SLC6A11P48066 632 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 FZD5Q13467 585 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 SLC9A5Q14940 896 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 LBX2Q6XYB7 198 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 MILR1Q7Z6M3 343 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 SEC14L1Q92503 715 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 UBXN4Q92575 508 aa5□□□□□ -1.61
HMGB1P6-201ENST00000569046 KISS1RQ969F8 398 aaPredicted RBP5□□□□□ -1.61
HMGB1P6-201ENST00000569046 DACT3Q96B18 629 aaPredicted RBP5□□□□□ -1.61
HMGB1P6-201ENST00000569046 MRPS23Q9Y3D9 190 aaKnown RBP5□□□□□ -1.61
HMGB1P6-201ENST00000569046 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 PLA2G1BP04054 148 aaKnown RBP4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 NCAM1P13591 858 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 PFKLP17858 780 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 GPR85P60893 370 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 FOXO4P98177 505 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 TARBP2Q15633 366 aaKnown RBP4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 LONRF2Q1L5Z9 754 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 CCDC144BQ3MJ40 725 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 CIAPIN1Q6FI81 312 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 CNKSR3Q6P9H4 555 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 AMIGO3Q86WK7 504 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 IFNL3Q8IZI9 196 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 FAM26EQ8N5C1 309 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 NOX5Q96PH1 765 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 DHRS4Q9BTZ2 278 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 RNF38Q9H0F5 515 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 AP5M1Q9H0R1 490 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 PIF1Q9H611 641 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 KANSL2Q9H9L4 492 aa4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 COA3Q9Y2R0 106 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 ARID1BQ8NFD5 2236 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P6-201ENST00000569046 KIF21BO75037 1637 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 TADA3O75528 432 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 C8BP07358 591 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZSCAN22P10073 491 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 SUMO1P63165 101 aaKnown RBP4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 VMACQ2NL98 169 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZNF385BQ569K4 471 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 EMC4Q5J8M3 183 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 STEAP3Q658P3 488 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 SPOCD1Q6ZMY3 1216 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 ARRDC4Q8NCT1 418 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 SMARCC2Q8TAQ2 1214 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 CPA5Q8WXQ8 436 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 PTPRN2Q92932 1015 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 KCNJ15Q99712 375 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms