RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	PTGIS	Q16647	500 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	ZNF697	Q5TEC3	545 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	MYSM1	Q5VVJ2	828 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	MCTP2	Q6DN12	878 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	PPP1R18	Q6NYC8	613 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	CPLX2	Q6PUV4	134 aa	Known RBP	11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	RUFY3	Q7L099	469 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	DEFB123	Q8N688	67 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	KCNB2	Q92953	911 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	BRPF3	Q9ULD4	1205 aa		11.89	□□□□□ -0.51
UBR1-207	ENST00000568782	GRIN2D	O15399	1336 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	SMCO2	A6NFE2	343 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	SOX1	O00570	391 aa	Predicted RBP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	CPLX1	O14810	134 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	MAFG	O15525	162 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	PFKM	P08237	780 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	ACTN1	P12814	892 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	CSF2RA	P15509	400 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	ITGB8	P26012	769 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	ZNF76	P36508	570 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	CCL23	P55773	120 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	C9orf50	Q5SZB4	431 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	TRIM22	Q8IYM9	498 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	FBXL16	Q8N461	479 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	IL31RA	Q8NI17	732 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	ALG1	Q9BT22	464 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	USP26	Q9BXU7	913 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	IL23A	Q9NPF7	189 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	TRMT13	Q9NUP7	481 aa	Known RBP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	ZNF215	Q9UL58	517 aa	Predicted RBP	11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	PCDHA6	Q9UN73	950 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	PCDHA8	Q9Y5H6	950 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	DOCK5	Q9H7D0	1870 aa		11.88	□□□□□ -0.51
UBR1-207	ENST00000568782	CNTNAP5	Q8WYK1	1306 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	SORBS3	O60504	671 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	PARN	O95453	639 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	GNAT1	P11488	350 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	CYP2C9	P11712	490 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	CPA1	P15085	419 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	UBA1	P22314	1058 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	GNA11	P29992	359 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	ICAM3	P32942	547 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	RFC2	P35250	354 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	PSEN2	P49810	448 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	MRPS9	P82933	396 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	SMAD3	P84022	425 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	MTMR1	Q13613	665 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	MFSD10	Q14728	455 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	KIAA0753	Q2KHM9	967 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	METTL7B	Q6UX53	244 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	CYFIP1	Q7L576	1253 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	CAGE1	Q8TC20	777 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	BICD2	Q8TD16	824 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	TNPO1	Q92973	898 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	GPRASP2	Q96D09	838 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	ZFP91	Q96JP5	570 aa	Predicted RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	INPP4A	Q96PE3	977 aa	Predicted RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	SENP7	Q9BQF6	1050 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	NOC4L	Q9BVI4	516 aa	Known RBP	11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	TM6SF1	Q9BZW5	370 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	C6orf50	Q9HD87	102 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	RIC8A	Q9NPQ8	531 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	BARHL2	Q9NY43	387 aa		11.87	□□□□□ -0.51
UBR1-207	ENST00000568782	FRMPD4	Q14CM0	1322 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	SPATA31C2	B4DYI2	1134 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782		H3BRB1	525 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	PITPNM1	O00562	1244 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	RGS20	O76081	388 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ZNF286B	P0CG31	522 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ACR	P10323	421 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	SCG2	P13521	617 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ADD1	P35611	737 aa	Known RBP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	AP3B2	Q13367	1082 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	COL9A3	Q14050	684 aa	Predicted RBP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	UBE2S	Q16763	222 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	HSDL1	Q3SXM5	330 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	WWC2	Q6AWC2	1192 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ZNF365	Q70YC5	407 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	SESTD1	Q86VW0	696 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	CCDC148	Q8NFR7	591 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	TUT1	Q9H6E5	874 aa	Known RBP	11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ZSWIM6	Q9HCJ5	1215 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	TCEAL9	Q9UHQ7	104 aa		11.86	□□□□□ -0.51
UBR1-207	ENST00000568782	ZBBX	A8MT70	800 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	STXBP3	O00186	592 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	PRPF3	O43395	683 aa	Known RBP	11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	F2	P00734	622 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	CDC27	P30260	824 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	SP2	Q02086	613 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	SP4	Q02446	784 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	SSRP1	Q08945	709 aa	Known RBP	11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	PFKFB3	Q16875	520 aa	Predicted RBP	11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	TMEM240	Q5SV17	173 aa		11.85	□□□□□ -0.51
UBR1-207	ENST00000568782	AFAP1L1	Q8TED9	768 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms