RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 RIOX2Q8IUF8 465 aa8.15□□□□□ -1.1
CYLD-213ENST00000568744 AHI1Q8N157 1196 aa8.15□□□□□ -1.1
CYLD-213ENST00000568744 PPM1KQ8N3J5 372 aa8.15□□□□□ -1.1
CYLD-213ENST00000568744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.15□□□□□ -1.1
CYLD-213ENST00000568744 CBLCQ9ULV8 474 aa8.15□□□□□ -1.1
CYLD-213ENST00000568744 NKRFO15226 690 aaKnown RBP eCLIP8.14□□□□□ -1.11
CYLD-213ENST00000568744 GLRX3O76003 335 aaKnown RBP8.14□□□□□ -1.11
CYLD-213ENST00000568744 CKMP06732 381 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 KCNA6P17658 529 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 NCLP19338 710 aaKnown RBP8.14□□□□□ -1.11
CYLD-213ENST00000568744 SOX5P35711 763 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 NR1I3Q14994 352 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 PCBP1Q15365 356 aaKnown RBP eCLIP8.14□□□□□ -1.11
CYLD-213ENST00000568744 TMEM177Q53S58 311 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 OTOP3Q7RTS5 596 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 OSTM1Q86WC4 334 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 THNSL2Q86YJ6 484 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 NETO2Q8NC67 525 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 PANK1Q8TE04 598 aa8.14□□□□□ -1.11
CYLD-213ENST00000568744 LIN37Q96GY3 246 aaPredicted RBP8.14□□□□□ -1.11
CYLD-213ENST00000568744 GSG1L2A8MUP6 293 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 KCNK3O14649 394 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 HGSO14964 777 aaPredicted RBP8.13□□□□□ -1.11
CYLD-213ENST00000568744 SRGAP3O43295 1099 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 PDE6AP16499 860 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 JUNBP17275 347 aaPredicted RBP8.13□□□□□ -1.11
CYLD-213ENST00000568744 CHRNA2Q15822 529 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 PKN3Q6P5Z2 889 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 RPTNQ6XPR3 784 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 ARHGAP36Q6ZRI8 547 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 C2orf69Q8N8R5 385 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 SEC14L1Q92503 715 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 PEX11GQ96HA9 241 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 CELF4Q9BZC1 486 aaKnown RBP8.13□□□□□ -1.11
CYLD-213ENST00000568744 CAAP1Q9H8G2 361 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 CABP5Q9NP86 173 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 SLC6A20Q9NP91 592 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 PALD1Q9ULE6 856 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 MAPRE3Q9UPY8 281 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 HCFC2Q9Y5Z7 792 aa8.13□□□□□ -1.11
CYLD-213ENST00000568744 SLC27A2O14975 620 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 MAFKO60675 156 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 KRT37O76014 449 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 NPTXRO95502 500 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 ITGB5P18084 799 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 JAM2P57087 298 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 TMEM62Q0P6H9 643 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 GPR19Q15760 415 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 PTRH1Q86Y79 214 aaKnown RBP8.12□□□□□ -1.11
CYLD-213ENST00000568744 IRF2BP1Q8IU81 584 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 DIRC2Q96SL1 478 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 CD244Q9BZW8 370 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 DSEQ9UL01 958 aa8.12□□□□□ -1.11
CYLD-213ENST00000568744 ZNF503-AS2A6NEH8 195 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 WNT9AO14904 365 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 SGSM2O43147 1006 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 STAT3P40763 770 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 SLC6A11P48066 632 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 PRR5P85299 388 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 ZC3H14Q6PJT7 736 aaKnown RBP8.11□□□□□ -1.11
CYLD-213ENST00000568744 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 RBM12BQ8IXT5 1001 aaKnown RBP8.11□□□□□ -1.11
CYLD-213ENST00000568744 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 TMX1Q9H3N1 280 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 NSUN3Q9H649 340 aaKnown RBP8.11□□□□□ -1.11
CYLD-213ENST00000568744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.11□□□□□ -1.11
CYLD-213ENST00000568744 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 MYOTQ9UBF9 498 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
CYLD-213ENST00000568744 TAL1P17542 331 aaPredicted RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 SART3Q15020 963 aaKnown RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 MLANAQ16655 118 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 PTPROQ16827 1216 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 PLEKHN1Q494U1 663 aaPredicted RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
CYLD-213ENST00000568744 TMC6Q7Z403 805 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 YIPF4Q9BSR8 244 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
CYLD-213ENST00000568744 FAM83GA6ND36 823 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 ABLIM1O14639 778 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 GAS7O60861 476 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 ZBTB7AO95365 584 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 POU3F2P20265 443 aaPredicted RBP8.09□□□□□ -1.11
CYLD-213ENST00000568744 MAPKAPK2P49137 400 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 EMC4Q5J8M3 183 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 KRT26Q7Z3Y9 468 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 RNF180Q86T96 592 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 NXPE1Q8N323 547 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 CHST14Q8NCH0 376 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 ZCRB1Q8TBF4 217 aaKnown RBP8.09□□□□□ -1.11
CYLD-213ENST00000568744 ALG3Q92685 438 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms