RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 DDRGK1Q96HY6 314 aa13.99□□□□□ -0.17
VPS9D1-207ENST00000568691 POP1Q99575 1024 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-207ENST00000568691 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
VPS9D1-207ENST00000568691 CACNA1BQ00975 2339 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 ZFHX4Q86UP3 3567 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 PRR23AA6NEV1 266 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 H0Y858 1186 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 REC8O95072 547 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 PDGFBP01127 241 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 ICAM1P05362 532 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 AVPR2P30518 371 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 SLC1A4P43007 532 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 ARHGAP1Q07960 439 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 CAMK1Q14012 370 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 SCFD2Q8WU76 684 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 ATOH1Q92858 354 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 HAUS7Q99871 368 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 FSD1Q9BTV5 496 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 RANBP17Q9H2T7 1088 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 TLR9Q9NR96 1032 aa13.98□□□□□ -0.17
VPS9D1-207ENST00000568691 LAMA4Q16363 1823 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 DMXL1Q9Y485 3027 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 HAS3O00219 553 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 HIP1O00291 1037 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 EYA4O95677 639 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 TXNP10599 105 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 ATP5JP18859 108 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 PTK7Q13308 1070 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 ADAM15Q13444 863 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 PKN1Q16512 942 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 ERMP1Q7Z2K6 904 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 SUGP1Q8IWZ8 645 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 OSBP2Q969R2 916 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 CLEC1BQ9P126 229 aa13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-207ENST00000568691 KMT2BQ9UMN6 2715 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 C5orf67F2Z3F1 127 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 SEC24BO95487 1268 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 AMHP03971 560 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 RBM25P49756 843 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 IKQ13123 557 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 TSHZ3Q63HK5 1081 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-207ENST00000568691 RAD50Q92878 1312 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 NMT2O60551 498 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 KRT37O76014 449 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 CALML3P27482 149 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 SLC16A2P36021 539 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 RPS6P62753 249 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 SIGLEC14Q08ET2 396 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 LY6KQ17RY6 165 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 ZNF292O60281 2723 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
VPS9D1-207ENST00000568691 MED19A0JLT2 244 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 PTPDC1A2A3K4 754 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 NCK2O43639 380 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 UPP2O95045 317 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 CHMLP26374 656 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 PSEN2P49810 448 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 TFAP4Q01664 338 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 PDE4DQ08499 809 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 SMRP1Q8NCR6 262 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 YME1L1Q96TA2 773 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 IGFLR1Q9H665 355 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
VPS9D1-207ENST00000568691 GLP2RO95838 553 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 F2P00734 622 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 DNAJB1P25685 340 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 NBL1P41271 181 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 NOVP48745 357 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 PDE4BQ07343 736 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 BTNL9Q6UXG8 535 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 ADGRD2Q7Z7M1 963 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
VPS9D1-207ENST00000568691 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms