RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 BANK1Q8NDB2 785 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 ESR2Q92731 530 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 KCNH6Q9H252 994 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 NR3C2P08235 984 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 THPOP40225 353 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 NT5C2P49902 561 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 SERINC5Q86VE9 423 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 DGKHQ86XP1 1220 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 TBC1D10CQ8IV04 446 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 PRKAG3Q9UGI9 489 aa13.78□□□□□ -0.2
GTF3C1-209ENST00000568569 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 H3BNC9 293 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 SIP14410 1827 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 NHLH1Q02575 133 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 ZP2Q05996 745 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 COL19A1Q14993 1142 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 MYSM1Q5VVJ2 828 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 IQCA1Q86XH1 822 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 FBXO11Q86XK2 927 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 SEPT8Q92599 483 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 SPATA33Q96N06 139 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 PCDHB15Q9Y5E8 787 aa13.77□□□□□ -0.21
GTF3C1-209ENST00000568569 NEDD4P46934 1319 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 CFBP00751 764 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 GPM6BQ13491 265 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 HIC1Q14526 733 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 FBXL18Q96ME1 805 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
GTF3C1-209ENST00000568569 C17orf102A2RUQ5 167 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 RBAK-RBAKDNI3L0D1 243 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 NCK2O43639 380 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 CAND2O75155 1236 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 GGPS1O95749 300 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 HSD17B4P51659 736 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 ADHFE1Q8IWW8 467 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 C16orf70Q9BSU1 422 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 C5orf42Q9H799 3197 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 TRIOO75962 3097 aa13.75□□□□□ -0.21
GTF3C1-209ENST00000568569 SORBS3O60504 671 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 RGS20O76081 388 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 UPP2O95045 317 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 TGFB3P10600 412 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 MYCLP12524 364 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 HOXC8P31273 242 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 PDE1AP54750 535 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 MFAP1P55081 439 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 GHRHRQ02643 423 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 ANKS1AQ92625 1134 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 JMJD4Q9H9V9 463 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
GTF3C1-209ENST00000568569 H3BRB1 525 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 ZNF213O14771 459 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 OPLAHO14841 1288 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 KDM4AO75164 1064 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 CTSHP09668 335 aa13.73□□□□□ -0.21
GTF3C1-209ENST00000568569 SMIM10L2AP0DMW4 78 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms