RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 RNF10Q8N5U6 811 aaKnown RBP11.93□□□□□ -0.5
PALB2-206ENST00000568219 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ARHGAP20Q9P2F6 1191 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 ASIC3Q9UHC3 531 aa11.93□□□□□ -0.5
PALB2-206ENST00000568219 G3V3G9 751 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 UPP2O95045 317 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 ADAM9Q13443 819 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 CALCRLQ16602 461 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 GLE1Q53GS7 698 aaKnown RBP11.92□□□□□ -0.5
PALB2-206ENST00000568219 FAM83BQ5T0W9 1011 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 KDM7AQ6ZMT4 941 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 DNAJC7Q99615 494 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 CTTNBP2NLQ9P2B4 639 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
PALB2-206ENST00000568219 DAAM1Q9Y4D1 1078 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 CCDC169A6NNP5 214 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 TTI1O43156 1089 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 ZNF449Q6P9G9 518 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 FAM47EQ6ZV65 393 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 STMN4Q9H169 189 aaPredicted RBP11.92□□□□□ -0.5
PALB2-206ENST00000568219 KLHL14Q9P2G3 628 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
PALB2-206ENST00000568219 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 CCDC160A6NGH7 325 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 ANP32DO95626 131 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 GNA11P29992 359 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 GNAQP50148 359 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 MUM1Q2TAK8 710 aa11.92□□□□□ -0.5
PALB2-206ENST00000568219 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
PALB2-206ENST00000568219 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 ACSL3O95573 720 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
PALB2-206ENST00000568219 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
PALB2-206ENST00000568219 TRIM51Q9BSJ1 452 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 DDX23Q9BUQ8 820 aaKnown RBP11.91□□□□□ -0.5
PALB2-206ENST00000568219 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
PALB2-206ENST00000568219 LRRD1A4D1F6 860 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 SPOPO43791 374 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 PDE8AO60658 829 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 SUN1O94901 812 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 HLFQ16534 295 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 TAOK1Q7L7X3 1001 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 PRMT1Q99873 361 aaKnown RBP11.91□□□□□ -0.5
PALB2-206ENST00000568219 RAB17Q9H0T7 212 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 CPP00450 1065 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
PALB2-206ENST00000568219 CHN1P15882 459 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 GBP1P32455 592 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 HOMER3Q9NSC5 361 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
PALB2-206ENST00000568219 FSBPO95073 299 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 CYP2D6P10635 497 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 CUL5Q93034 780 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 PACSIN1Q9BY11 444 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 MROH1Q8NDA8 1641 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 CCDC65Q8IXS2 484 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 SERPING1P05155 500 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
PALB2-206ENST00000568219 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
PALB2-206ENST00000568219 BIRC3Q13489 604 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
PALB2-206ENST00000568219 FAM26FQ5R3K3 315 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 GSTA5Q7RTV2 222 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 TSC22D3Q99576 134 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.5
PALB2-206ENST00000568219 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 ASAP1Q9ULH1 1129 aa11.9□□□□□ -0.5
PALB2-206ENST00000568219 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.51
PALB2-206ENST00000568219 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 PPP1R2P41236 205 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 FKBP3Q00688 224 aaKnown RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
PALB2-206ENST00000568219 GFPT2O94808 682 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 PBX1P40424 430 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
PALB2-206ENST00000568219 SNX1Q13596 522 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms