RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 AFG1LQ8WV93 481 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 BADQ92934 168 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 CUL5Q93034 780 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 TMEM39AQ9NV64 488 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 PRKAG2Q9UGJ0 569 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 UBIAD1Q9Y5Z9 338 aa9.41□□□□□ -0.9
HDGFL3-205ENST00000568129 TANC1Q9C0D5 1861 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 TLR3O15455 904 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 FIBPO43427 364 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 B4GALT4O60513 344 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 SEC24BO95487 1268 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 SCG2P13521 617 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 ITGB5P18084 799 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 HOXC8P31273 242 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 FGD1P98174 961 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 NEDD9Q14511 834 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 DGKDQ16760 1214 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 HSDL1Q3SXM5 330 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 MCTP2Q6DN12 878 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 GPRASP2Q96D09 838 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 VWCEQ96DN2 955 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 CTAGE1Q96RT6 745 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 LBHD1Q9BQE6 289 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 C16orf70Q9BSU1 422 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 UBE2OQ9C0C9 1292 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 SH3GLB2Q9NR46 395 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 PCDHA6Q9UN73 950 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 PCDHA8Q9Y5H6 950 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 MRVI1Q9Y6F6 885 aa9.4□□□□□ -0.9
HDGFL3-205ENST00000568129 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 F2P00734 622 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP3A4P08684 503 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 SUPT20HL2P0C7V6 817 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 KCNA2P16389 499 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 SREBF1P36956 1147 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 NAPAP54920 295 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 PSMC6P62333 389 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 RBL2Q08999 1139 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 GNPTABQ3T906 1256 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 METTL7BQ6UX53 244 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 C16orf59Q7L2K0 433 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 HEATR3Q7Z4Q2 680 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 DHX37Q8IY37 1157 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 GIMAP8Q8ND71 665 aaPredicted RBP9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 NOC4LQ9BVI4 516 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 JADE2Q9NQC1 790 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 MYO9BQ13459 2157 aa9.39□□□□□ -0.91
HDGFL3-205ENST00000568129 GBF1Q92538 1859 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 EVPLQ92817 2033 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 M0R2N6 131 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 MEIS1O00470 390 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 EDIL3O43854 480 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 PFKFB2O60825 505 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 GGPS1O95749 300 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 MYL3P08590 195 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 RAG1P15918 1043 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 ADCY7P51828 1080 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 EPHB4P54760 987 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 SHHQ15465 462 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 UBE2SQ16763 222 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 NIPA1Q7RTP0 329 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 NLRX1Q86UT6 975 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 ZFP91Q96JP5 570 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 SPATA33Q96N06 139 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 GPR20Q99678 358 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 MXRA8Q9BRK3 442 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 UPF3BQ9BZI7 483 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 TRPV6Q9H1D0 765 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 RTEL1Q9NZ71 1219 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 LOXHD1Q8IVV2 1947 aa9.38□□□□□ -0.91
HDGFL3-205ENST00000568129 NFASCO94856 1347 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 PTPRSQ13332 1948 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 ADAMTS3O15072 1205 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 ATP9AO75110 1047 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 GNA11P29992 359 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 CIITAP33076 1130 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 PSEN2P49810 448 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 ADAM17P78536 824 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 FPGSQ05932 587 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms