RNA–Protein interactions for RNA: ENST00000568067.1

TMEM87A-210, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-210ENST00000568067 USP53Q70EK8 1073 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 SAPCD2Q86UD0 394 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 TP53I13Q8NBR0 393 aaPredicted RBP5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 PHF20Q9BVI0 1012 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 EPB41L1Q9H4G0 881 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 NGRNQ9NPE2 291 aaKnown RBP5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 PMF1-BGLAPU3KQ54 211 aa5.4□□□□□ -1.54
TMEM87A-210ENST00000568067 SH3D21A4FU49 640 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 MSCO60682 206 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 BMP7P18075 431 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 SSRP1Q08945 709 aaKnown RBP5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 IFRD2Q12894 506 aaPredicted RBP5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 FAM126BQ8IXS8 530 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 SMARCC2Q8TAQ2 1214 aa5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
TMEM87A-210ENST00000568067 MAFKO60675 156 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 C8BP07358 591 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 CYP2C8P10632 490 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 GPR85P60893 370 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 DLX2Q07687 328 aaPredicted RBP5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 KIZQ2M2Z5 673 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 ZC3H12BQ5HYM0 836 aaKnown RBP5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 STEAP3Q658P3 488 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 CYP4F22Q6NT55 531 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 KCNT2Q6UVM3 1135 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 IFNL3Q8IZI9 196 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.38□□□□□ -1.551e-8■■■■■ 31.4
TMEM87A-210ENST00000568067 PHOSPHO1Q8TCT1 267 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 DEPDC7Q96QD5 511 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 PDGFDQ9GZP0 370 aaPredicted RBP5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 SLC6A20Q9NP91 592 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 PFDN2Q9UHV9 154 aa5.38□□□□□ -1.55
TMEM87A-210ENST00000568067 TRBV23-1A0A0A0MS06 115 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 FAM221BA6H8Z2 402 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 CCDC85CA6NKD9 419 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 DIAPH1O60610 1272 aaKnown RBP5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 SASH1O94885 1247 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 VMACQ2NL98 169 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 MAMDC2Q7Z304 686 aaPredicted RBP5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 ZC3H18Q86VM9 953 aaKnown RBP5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 SP8Q8IXZ3 490 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 SREK1Q8WXA9 508 aaKnown RBP5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 NOX5Q96PH1 765 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 JAM3Q9BX67 310 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 ZCCHC4Q9H5U6 513 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 HSPBP1Q9NZL4 362 aa5.37□□□□□ -1.55
TMEM87A-210ENST00000568067 KRIT1O00522 736 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 FOXD2O60548 495 aaPredicted RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 FAM153BP0C7A2 387 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 SUMO1P63165 101 aaKnown RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 CR1LQ2VPA4 569 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 HABP4Q5JVS0 413 aaKnown RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 FAM209AQ5JX71 171 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 FOXB2Q5VYV0 432 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 CD300LDQ6UXZ3 194 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 LIPIQ6XZB0 460 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 OTOP3Q7RTS5 596 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 TRIM48Q8IWZ4 208 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 FAM26EQ8N5C1 309 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 KYQ8NBH2 561 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 ZNF526Q8TF50 670 aaPredicted RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 PTPRN2Q92932 1015 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 DDX11Q96FC9 970 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 IPO9Q96P70 1041 aaKnown RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 CDC6Q99741 560 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 DHRS4Q9BTZ2 278 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 C11orf84Q9BUA3 381 aaPredicted RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 XYLT2Q9H1B5 865 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 SPATA6Q9NWH7 488 aaPredicted RBP5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 PCDHB4Q9Y5E5 795 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 ASXL2Q76L83 1435 aa5.36□□□□□ -1.55
TMEM87A-210ENST00000568067 BLACEA4D250 179 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 AQP7O14520 342 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 WNT9AO14904 365 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 SUV39H1O43463 412 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 C6orf222P0C671 652 aaPredicted RBP5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 GRK2P25098 689 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 GRK3P35626 688 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 SLURP1P55000 103 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 NKX3-2P78367 333 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 TTLL11Q8NHH1 800 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 KISS1RQ969F8 398 aaPredicted RBP5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 ZBTB8AQ96BR9 441 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 TOE1Q96GM8 510 aaKnown RBP5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 SRPK1Q96SB4 655 aaKnown RBP5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 DTLQ9NZJ0 730 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 MYOTQ9UBF9 498 aa5.35□□□□□ -1.55
TMEM87A-210ENST00000568067 PPARGC1AQ9UBK2 798 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms