RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 HVCN1Q96D96 273 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
SIN3A-208ENST00000567289 NUCKS1Q9H1E3 243 aaKnown RBP12.81□□□□□ -0.36
SIN3A-208ENST00000567289 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
SIN3A-208ENST00000567289 WDR91A4D1P6 747 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SFI1A8K8P3 1242 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 LSP1P33241 339 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 BIRC3Q13489 604 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 HDAC7Q8WUI4 952 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 CCDC127Q96BQ5 260 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 IL17RAQ96F46 866 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 ZSCAN5CA6NGD5 496 aaPredicted RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 PDHA1P08559 390 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 KCNB2Q92953 911 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SPDL1Q96EA4 605 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 RNPC3Q96LT9 517 aaKnown RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 CPS1P31327 1500 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 ERBB3P21860 1342 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 ENO4A6NNW6 628 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 POLE2P56282 527 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 TAF11Q15544 211 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 NLRP10Q86W26 655 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 DNAAF5Q86Y56 855 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 PIGSQ96S52 555 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SPATS2LQ9NUQ6 558 aaKnown RBP12.8□□□□□ -0.36
SIN3A-208ENST00000567289 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
SIN3A-208ENST00000567289 SUN1O94901 812 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 RFC4P35249 363 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 STK4Q13043 487 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 PPM1KQ8N3J5 372 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 COL4A3BPQ9Y5P4 624 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 SEMA3EO15041 775 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-208ENST00000567289 CFBP00751 764 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 GNPTABQ3T906 1256 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 ANKRD20A3Q5VUR7 823 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-208ENST00000567289 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 SKAP2O75563 359 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-208ENST00000567289 UBE2SQ16763 222 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 RASIP1Q5U651 963 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
SIN3A-208ENST00000567289 KAZNQ674X7 775 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 HNRNPLLQ8WVV9 542 aaKnown RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 ATP5DP30049 168 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 FAM114A2Q9NRY5 505 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 CAPN6Q9Y6Q1 641 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 DPYDQ12882 1025 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 DDB1Q16531 1140 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 TMTC3Q6ZXV5 915 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 MDM1Q8TC05 714 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 DDX12PQ92771 950 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 DDAH1O94760 285 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 UBXN2AP68543 259 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-208ENST00000567289 NEK9Q8TD19 979 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
SIN3A-208ENST00000567289 MAP3K15Q6ZN16 1313 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 ABCC12Q96J65 1359 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 RASGRF2O14827 1237 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 BMP6P22004 513 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 HSPA1LP34931 641 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.36
SIN3A-208ENST00000567289 INTS13Q9NVM9 706 aa12.77□□□□□ -0.36
SIN3A-208ENST00000567289 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 UFL1O94874 794 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 HSPA2P54652 639 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 FYB2Q5VWT5 728 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.37
SIN3A-208ENST00000567289 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms