RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
SPG7-216ENST00000567138 PTK7Q13308 1070 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 IKBKEQ14164 716 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 ALX1Q15699 326 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
SPG7-216ENST00000567138 DGKDQ16760 1214 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
SPG7-216ENST00000567138 TRAF7Q6Q0C0 670 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
SPG7-216ENST00000567138 UBA5Q9GZZ9 404 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
SPG7-216ENST00000567138 SORBS3O60504 671 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 EFCAB14O75071 495 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 FGAP02671 866 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
SPG7-216ENST00000567138 PDE4AP27815 886 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 MYOCDQ8IZQ8 938 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
SPG7-216ENST00000567138 ABCB11O95342 1321 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 GRXCR2A6NFK2 248 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 LGR5O75473 907 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 F2P00734 622 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 PDE1AP54750 535 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 HIC1Q14526 733 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 STXBP2Q15833 593 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
SPG7-216ENST00000567138 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 MRPL38Q96DV4 380 aaKnown RBP13.15□□□□□ -0.3
SPG7-216ENST00000567138 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
SPG7-216ENST00000567138 INSL6Q9Y581 213 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
SPG7-216ENST00000567138 NEDD4P46934 1319 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 HAS3O00219 553 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 AMHP03971 560 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 MRE11P49959 708 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
SPG7-216ENST00000567138 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
SPG7-216ENST00000567138 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
SPG7-216ENST00000567138 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 PPTC7Q8NI37 304 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 NEK9Q8TD19 979 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
SPG7-216ENST00000567138 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
SPG7-216ENST00000567138 DCXO43602 365 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
SPG7-216ENST00000567138 ALADP13716 330 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 THPOP40225 353 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 HTRA4P83105 476 aaPredicted RBP13.13□□□□□ -0.31
SPG7-216ENST00000567138 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 TCEAL5Q5H9L2 206 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
SPG7-216ENST00000567138 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
SPG7-216ENST00000567138 TTC14Q96N46 770 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
SPG7-216ENST00000567138 LOXHD1Q8IVV2 1947 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 DHX16O60231 1041 aaKnown RBP13.12□□□□□ -0.31
SPG7-216ENST00000567138 UPP2O95045 317 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 NR3C2P08235 984 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 NHLH1Q02575 133 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
SPG7-216ENST00000567138 GPM6BQ13491 265 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 LAMC2Q13753 1193 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 PTPROQ16827 1216 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
SPG7-216ENST00000567138 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
SPG7-216ENST00000567138 CFBP00751 764 aa13.11□□□□□ -0.31
SPG7-216ENST00000567138 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
SPG7-216ENST00000567138 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
SPG7-216ENST00000567138 ZP2Q05996 745 aa13.11□□□□□ -0.31
SPG7-216ENST00000567138 PUS10Q3MIT2 529 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms