RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 ARHGAP44Q17R89 818 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 GRAMD1BQ3KR37 738 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 EFCAB2Q5VUJ9 269 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 CYB5RLQ6IPT4 315 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 RUNDC1Q96C34 613 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 MS4A5Q9H3V2 200 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 CATSPERZQ9NTU4 200 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 IFT140Q96RY7 1462 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 ARHGEF11O15085 1522 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 TRIM75PA6NK02 468 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 FAM47E-STBD1D6RA91 191 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 GSTA4O15217 222 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
KARS-208ENST00000566772 WDHD1O75717 1129 aaPredicted RBP7.34□□□□□ -1.23
KARS-208ENST00000566772 ZRANB2O95218 330 aaKnown RBP eCLIP7.34□□□□□ -1.23
KARS-208ENST00000566772 VAV1P15498 845 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 PHKG2P15735 406 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 GPR3P46089 330 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 RBM10P98175 930 aaKnown RBP7.34□□□□□ -1.23
KARS-208ENST00000566772 TERF2Q15554 542 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 CLUL1Q15846 466 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 CLEC16AQ2KHT3 1053 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 SGO2Q562F6 1265 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 GPR158Q5T848 1215 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 MBLAC2Q68D91 279 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 OTOP1Q7RTM1 612 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 RASSF3Q86WH2 238 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 KSR1Q8IVT5 923 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 NPAS3Q8IXF0 933 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 TMEM130Q8N3G9 435 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 NUP88Q99567 741 aaPredicted RBP7.34□□□□□ -1.23
KARS-208ENST00000566772 ELAC2Q9BQ52 826 aaKnown RBP7.34□□□□□ -1.23
KARS-208ENST00000566772 CHD1O14646 1710 aa7.34□□□□□ -1.23
KARS-208ENST00000566772 FGAP02671 866 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 CELA2BP08218 269 aaPredicted RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 GSTM1P09488 218 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 VCAM1P19320 739 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 SLC9A1P19634 815 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 GRK2P25098 689 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 BMP8BP34820 402 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 LACTBP83111 547 aaPredicted RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 ACAP2Q15057 778 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 CRY1Q16526 586 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 INO80DQ53TQ3 878 aaPredicted RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 FAM83BQ5T0W9 1011 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 SFRP5Q5T4F7 317 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 LYPD4Q6UWN0 246 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 OSTM1Q86WC4 334 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 DAGLBQ8NCG7 672 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 ENOX1Q8TC92 643 aaKnown RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 LMBR1Q8WVP7 490 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 EZH1Q92800 747 aaPredicted RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 SCYL1Q96KG9 808 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 MMP19Q99542 508 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 DUSP23Q9BVJ7 150 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 DDX21Q9NR30 783 aaKnown RBP eCLIP7.33□□□□□ -1.24
KARS-208ENST00000566772 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 FBXL7Q9UJT9 491 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
KARS-208ENST00000566772 NOC2LQ9Y3T9 749 aaKnown RBP7.33□□□□□ -1.24
KARS-208ENST00000566772 TOPBP1Q92547 1522 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 NPHP3-ACAD11A0A0J9YXS1 232 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 H7C1D1 291 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 PMM2O15305 246 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 AP1G1O43747 822 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 NRDCO43847 1150 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 ZBTB48P10074 688 aaPredicted RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 HSPA6P17066 643 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 PAMP19021 973 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 GRK3P35626 688 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 ZNF280AP59817 542 aaPredicted RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 SMAD3P84022 425 aaKnown RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 TRIM28Q13263 835 aaKnown RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 SMAD2Q15796 467 aaKnown RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 RRP12Q5JTH9 1297 aaKnown RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 ZFYVE27Q5T4F4 411 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 IFIT1BQ5T764 474 aaKnown RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 EEF1DP3Q658K8 133 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 ERAP2Q6P179 960 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 SHISA2Q6UWI4 295 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 FAM214BQ7L5A3 538 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 AMOTL1Q8IY63 956 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 ZNF655Q8N720 491 aaPredicted RBP7.32□□□□□ -1.24
KARS-208ENST00000566772 SLC35G2Q8TBE7 412 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 PARD3BQ8TEW8 1205 aa7.32□□□□□ -1.24
KARS-208ENST00000566772 PNISRQ8TF01 805 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms