RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
CCP110-208ENST00000566523 USP40Q9NVE5 1235 aa9.22□□□□□ -0.93
CCP110-208ENST00000566523 MSCO60682 206 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 CELA3BP08861 270 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 RPL13P26373 211 aaKnown RBP9.21□□□□□ -0.94
CCP110-208ENST00000566523 STAT5AP42229 794 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 STEAP3Q658P3 488 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 STK32CQ86UX6 486 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 TTLL6Q8N841 843 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 ST13P5Q8NFI4 369 aaPredicted RBP9.21□□□□□ -0.94
CCP110-208ENST00000566523 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 NGRNQ9NPE2 291 aaKnown RBP9.21□□□□□ -0.94
CCP110-208ENST00000566523 ARHGEF4Q9NR80 690 aa9.21□□□□□ -0.94
CCP110-208ENST00000566523 TCRBV5S2A0A599 114 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 E9PSI1 815 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 PRR31Q5SQ13 230 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 ARRDC4Q8NCT1 418 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 ADAMTS17Q8TE56 1095 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 AARSD1Q9BTE6 412 aaKnown RBP9.2□□□□□ -0.94
CCP110-208ENST00000566523 LNPKQ9C0E8 428 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 DUSP10Q9Y6W6 482 aa9.2□□□□□ -0.94
CCP110-208ENST00000566523 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 DGKIO75912 1065 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 FGFR1P11362 822 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 RSPO2Q6UXX9 243 aaPredicted RBP9.19□□□□□ -0.94
CCP110-208ENST00000566523 USP53Q70EK8 1073 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 PCDHB4Q9Y5E5 795 aa9.19□□□□□ -0.94
CCP110-208ENST00000566523 GJA9P57773 515 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 NKX3-2P78367 333 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 ADAM9Q13443 819 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 NTRK3Q16288 839 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 FERMT3Q86UX7 667 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 OSBP2Q969R2 916 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 TOE1Q96GM8 510 aaKnown RBP9.18□□□□□ -0.94
CCP110-208ENST00000566523 PHF20Q9BVI0 1012 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 KRTAP4-11Q9BYQ6 195 aa9.18□□□□□ -0.94
CCP110-208ENST00000566523 PPARGC1AQ9UBK2 798 aaKnown RBP9.18□□□□□ -0.94
CCP110-208ENST00000566523 PRODHO43272 600 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 ZC3H6P61129 1189 aaKnown RBP9.17□□□□□ -0.94
CCP110-208ENST00000566523 UBXN11Q5T124 520 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 YIPF4Q9BSR8 244 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 BDH2Q9BUT1 245 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 SMOC1Q9H4F8 434 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 MSRB2Q9Y3D2 182 aa9.17□□□□□ -0.94
CCP110-208ENST00000566523 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
CCP110-208ENST00000566523 NAALADL2Q58DX5 795 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 CYP4F22Q6NT55 531 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 TEPPQ6URK8 271 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 DCAF4Q8WV16 495 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 DDX1Q92499 740 aaKnown RBP9.16□□□□□ -0.94
CCP110-208ENST00000566523 ZNF669Q96BR6 464 aaPredicted RBP9.16□□□□□ -0.94
CCP110-208ENST00000566523 JAM3Q9BX67 310 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
CCP110-208ENST00000566523 LRG1P02750 347 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 CNR2P34972 360 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 PLP2Q04941 152 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 FAM26FQ5R3K3 315 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 KCNT2Q6UVM3 1135 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 SLC6A20Q9NP91 592 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 ASH2LQ9UBL3 628 aa9.15□□□□□ -0.94
CCP110-208ENST00000566523 TRAV20A0A0B4J274 112 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 STK10O94804 968 aaKnown RBP9.14□□□□□ -0.95
CCP110-208ENST00000566523 RGL3Q3MIN7 710 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 PRRT2Q7Z6L0 340 aaPredicted RBP9.14□□□□□ -0.95
CCP110-208ENST00000566523 LRRC47Q8N1G4 583 aaKnown RBP9.14□□□□□ -0.95
CCP110-208ENST00000566523 ZFYVE21Q9BQ24 234 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 TRIM55Q9BYV6 548 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 WASF3Q9UPY6 502 aa9.14□□□□□ -0.95
CCP110-208ENST00000566523 EFEMP1Q12805 493 aa9.13□□□□□ -0.95
CCP110-208ENST00000566523 YOD1Q5VVQ6 348 aaPredicted RBP9.13□□□□□ -0.95
CCP110-208ENST00000566523 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
CCP110-208ENST00000566523 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
CCP110-208ENST00000566523 TXNDC5Q8NBS9 432 aaKnown RBP9.13□□□□□ -0.95
CCP110-208ENST00000566523 PIP4K2CQ8TBX8 421 aa9.13□□□□□ -0.95
CCP110-208ENST00000566523 CNOT11Q9UKZ1 510 aaKnown RBP9.13□□□□□ -0.95
CCP110-208ENST00000566523 KRIT1O00522 736 aa9.12□□□□□ -0.95
CCP110-208ENST00000566523 DDX3XO00571 662 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCP110-208ENST00000566523 MAFKO60675 156 aa9.12□□□□□ -0.95
CCP110-208ENST00000566523 ZNF28P17035 718 aa9.12□□□□□ -0.95
CCP110-208ENST00000566523 NFKB2Q00653 900 aa9.12□□□□□ -0.95
CCP110-208ENST00000566523 MCTP2Q6DN12 878 aa9.12□□□□□ -0.95
CCP110-208ENST00000566523 BLACEA4D250 179 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 GPR85P60893 370 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
CCP110-208ENST00000566523 KIZQ2M2Z5 673 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 SPATC1Q76KD6 591 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 OTOP3Q7RTS5 596 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 SPATA9Q9BWV2 254 aa9.11□□□□□ -0.95
CCP110-208ENST00000566523 MROH6A6NGR9 719 aa9.1□□□□□ -0.95
CCP110-208ENST00000566523 SLC27A2O14975 620 aa9.1□□□□□ -0.95
CCP110-208ENST00000566523 GRK2P25098 689 aa9.1□□□□□ -0.95
CCP110-208ENST00000566523 GRK3P35626 688 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms