RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
TCF4-232ENST00000566286 B4GALNT4Q76KP1 1039 aa12.14□□□□□ -0.47
TCF4-232ENST00000566286 PIF1Q9H611 641 aa12.14□□□□□ -0.47
TCF4-232ENST00000566286 DMGDHQ9UI17 866 aaKnown RBP12.14□□□□□ -0.47
TCF4-232ENST00000566286 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
TCF4-232ENST00000566286 THSD7AQ9UPZ6 1657 aa12.14□□□□□ -0.47
TCF4-232ENST00000566286 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 USP17L21D6R901 530 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 ZNF263O14978 683 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CAMTA2O94983 1202 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 OATP04181 439 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 KLK7P49862 253 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 DYNLL1P63167 89 aaKnown RBP12.13□□□□□ -0.47
TCF4-232ENST00000566286 AMPD3Q01432 767 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
TCF4-232ENST00000566286 ANKRD40Q6AI12 368 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CEP89Q96ST8 783 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
TCF4-232ENST00000566286 RNF14Q9UBS8 474 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CAPN6Q9Y6Q1 641 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 ABCB11O95342 1321 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 MYH10P35580 1976 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 M0R2N6 131 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 GNAQP50148 359 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 KIF11P52732 1056 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 C8orf74Q6P047 294 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CNNM4Q6P4Q7 775 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
TCF4-232ENST00000566286 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
TCF4-232ENST00000566286 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
TCF4-232ENST00000566286 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 PP2D1A8MPX8 630 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 PJA2O43164 708 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 AKR1B10O60218 316 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 ZEB2O60315 1214 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 INPP5BP32019 993 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
TCF4-232ENST00000566286 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 HAUS3Q68CZ6 603 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 KRT26Q7Z3Y9 468 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 IFT20Q8IY31 132 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 ARHGAP20Q9P2F6 1191 aa12.12□□□□□ -0.47
TCF4-232ENST00000566286 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
TCF4-232ENST00000566286 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 NMT2O60551 498 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 MOCS3O95396 460 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 LIG3P49916 1009 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 ASIC1P78348 528 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 CABP7Q86V35 215 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 ATP8A2Q9NTI2 1148 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 PCDHA6Q9UN73 950 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 PCDHA8Q9Y5H6 950 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 PLCG1P19174 1290 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 SOX11P35716 441 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 STK4Q13043 487 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 TTMPQ5BVD1 217 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.11□□□□□ -0.47
TCF4-232ENST00000566286 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
TCF4-232ENST00000566286 TINF2Q9BSI4 451 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 EDEM3Q9BZQ6 932 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 SIK3Q9Y2K2 1263 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 FLT1P17948 1338 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 BTAF1O14981 1849 aa12.11□□□□□ -0.47
TCF4-232ENST00000566286 MAP3K7O43318 606 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 EVI5O60447 810 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms