RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 NAXEQ8NCW5 288 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 MYD88Q99836 296 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 FZD9O00144 591 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 ERC2O15083 957 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 PHKG2P15735 406 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 AK2P54819 239 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 PROSER3Q2NL68 480 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 HIBCHQ6NVY1 386 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 ENOSF1Q7L5Y1 443 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 ITM2CQ9NQX7 267 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 K7ENM7 598 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 ABCB4P21439 1286 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 HOXD12P35452 270 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 PFKPQ01813 784 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 RUSC1Q9BVN2 902 aa12.1□□□□□ -0.47
UBFD1-205ENST00000566136 GTPBP4Q9BZE4 634 aaKnown RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 UNKQ9C0B0 810 aaKnown RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 TNPO3Q9Y5L0 923 aaKnown RBP12.1□□□□□ -0.47
UBFD1-205ENST00000566136 CYP27B1O15528 508 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 SURF6O75683 361 aaKnown RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 ARIH2O95376 493 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 FOSL1P15407 271 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 ZNF132P52740 706 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 C11orf74Q86VG3 221 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 ADCY9O60503 1353 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 PAGE1O75459 146 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 REC8O95072 547 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 HPDP32754 393 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 TAF4BQ92750 862 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 FUBP3Q96I24 572 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBFD1-205ENST00000566136 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
UBFD1-205ENST00000566136 SYNRGQ9UMZ2 1314 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 TRIM75PA6NK02 468 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 H0Y3Z8 333 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 HOXB7P09629 217 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 RAC2P15153 192 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 ZKSCAN1P17029 563 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-205ENST00000566136 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-205ENST00000566136 GJA9P57773 515 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 FAM156AQ8NDB6 213 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 POLHQ9Y253 713 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 GRIN3BO60391 1043 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 FGFR4P22455 802 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
UBFD1-205ENST00000566136 PTPRNQ16849 979 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 PLBD1Q6P4A8 553 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 NKAIN3Q8N8D7 197 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 ST13P5Q8NFI4 369 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-205ENST00000566136 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-205ENST00000566136 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.48
UBFD1-205ENST00000566136 NCAPD2Q15021 1401 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 EREGO14944 169 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 JMJD7P0C870 316 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 RHCEP18577 417 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
UBFD1-205ENST00000566136 LIG3P49916 1009 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 TUBP50607 506 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 RHDQ02161 417 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 MECOMQ03112 1051 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
UBFD1-205ENST00000566136 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 TMCO3Q6UWJ1 677 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 MAP3K2Q9Y2U5 619 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 SNCAIPQ9Y6H5 919 aa12.07□□□□□ -0.48
UBFD1-205ENST00000566136 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-205ENST00000566136 GRIA2P42262 883 aa12.06□□□□□ -0.48
UBFD1-205ENST00000566136 PTPN14Q15678 1187 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms