RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 KDM6BO15054 1643 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 EFCAB8A8MWE9 144 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 MEIS1O00470 390 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 ENC1O14682 589 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 GAP43P17677 238 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 OSTNP61366 133 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 CACTINQ8WUQ7 758 aaKnown RBP14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 MAGEF1Q9HAY2 307 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 PPFIA2O75334 1257 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 TRIM11Q96F44 468 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 GNGT2O14610 69 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 ETF1P62495 437 aaKnown RBP14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 IL9RQ01113 521 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 EIF3CLB5ME19 914 aaKnown RBP14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 NVLO15381 856 aaKnown RBP14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 KRT1P04264 644 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 PHEXP78562 749 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 EIF3CQ99613 913 aaKnown RBP14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 MRPL46Q9H2W6 279 aaKnown RBP14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 LEMD3Q9Y2U8 911 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 ARL4AP40617 200 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 CDR2Q01850 454 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 KIF24Q5T7B8 1368 aa14.76□□□□□ -0.05
CX3CL1-204ENST00000565912 LAD1O00515 517 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 CCND2P30279 289 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 SUPT20HL1Q3ZLR7 823 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 ZNF526Q8TF50 670 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 SOS2Q07890 1332 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 THOC5Q13769 683 aaKnown RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 PIGSQ96S52 555 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 TSPYL2Q9H2G4 693 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 LMCD1Q9NZU5 365 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 MCF2LO15068 1137 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 MKRN3Q13064 507 aaKnown RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 SGO2Q562F6 1265 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 CYP4F22Q6NT55 531 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 SMYD4Q8IYR2 804 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 GDAP1Q8TB36 358 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 UBE2Q2Q8WVN8 375 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 FGD4Q96M96 766 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 INTS9Q9NV88 658 aaKnown RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 ZNF215Q9UL58 517 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 PCDHA5Q9Y5H7 936 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 MTERF2Q49AM1 385 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 HP1BP3Q5SSJ5 553 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 ARHGEF18Q6ZSZ5 1173 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 FBXO18Q8NFZ0 1043 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 TBCKQ8TEA7 893 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 WDR11Q9BZH6 1224 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 NLRP1Q9C000 1473 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 MLH3Q9UHC1 1453 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 OR6B2Q6IFH4 312 aa14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 DARS2Q6PI48 645 aaKnown RBP14.75□□□□□ -0.05
CX3CL1-204ENST00000565912 BLMP54132 1417 aaPredicted RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 FAM135BQ49AJ0 1406 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 WDR17Q8IZU2 1322 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 CXorf38Q8TB03 319 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 TTC1Q99614 292 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 CALN1Q9BXU9 219 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 ABCC4O15439 1325 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 BNIP3LO60238 219 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 FMNL1O95466 1100 aaPredicted RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 BASP1P80723 227 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 TCP11X2Q5H9J9 407 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 RNF217Q8TC41 542 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 P2RX5Q93086 422 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 SERPINB2P05120 415 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 BMP3P12645 472 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 MSH2P43246 934 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 PPWD1Q96BP3 646 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 COA7Q96BR5 231 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 MRFAP1L1Q96HT8 127 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 QTRT2Q9H974 415 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 DAAM1Q9Y4D1 1078 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GOLGA8QA0A0J9YX86 632 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GOLGA8OA6NCC3 632 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 GOLGA8NF8WBI6 632 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 KRT10P13645 584 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 CD58P19256 250 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 LIG3P49916 1009 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 SLC35F6Q8N357 371 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 FOXP1Q9H334 677 aaPredicted RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 KANSL2Q9H9L4 492 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
CX3CL1-204ENST00000565912 HMGB1P1B2RPK0 211 aaPredicted RBP14.73□□□□□ -0.05
CX3CL1-204ENST00000565912 TMED2Q15363 201 aa14.73□□□□□ -0.05
CX3CL1-204ENST00000565912 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms