RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HSPA4LO95757 839 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 SAT1P21673 171 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ATP2B4P23634 1241 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 NT5C1BQ96P26 610 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 COG4Q9H9E3 785 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 KDM5DQ9BY66 1539 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 BRD1O95696 1058 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 RPN1P04843 607 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 SRGAP2CP0DJJ0 459 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PSMA4P25789 261 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 PMLP29590 882 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ST13P50502 369 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 PLTPP55058 493 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 KRT40Q6A162 431 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 OSBPL1AQ9BXW6 950 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ABCC1P33527 1531 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 RIMS2Q9UQ26 1411 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PDHA1P08559 390 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 AARSP49588 968 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMG1-211ENST00000565324 MRPS35P82673 323 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 CYLC2Q14093 348 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 DEPDC1Q5TB30 811 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 CDC37L1Q7L3B6 337 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 TERB1Q8NA31 727 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 CNOT6LQ96LI5 555 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMG1-211ENST00000565324 PKD2L2Q9NZM6 624 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 SMCO2A6NFE2 343 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 RASA4BC9J798 803 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 RASA4O43374 803 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 MBD4O95243 580 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 TFCP2Q12800 502 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 MYSM1Q5VVJ2 828 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 POTEAQ6S8J7 498 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 LUZP2Q86TE4 346 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ST13P5Q8NFI4 369 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 MAGEB5Q9BZ81 275 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 ZMYND12Q9H0C1 365 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 SBNO1A3KN83 1393 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 TRAPPC8Q9Y2L5 1435 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PCP11498 1178 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 MAPK4P31152 587 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PPP6R3Q5H9R7 873 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 SLC35F6Q8N357 371 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PPM1KQ8N3J5 372 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 DCLK2Q8N568 766 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 KBTBD3Q8NAB2 608 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 TDRD7Q8NHU6 1098 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 MED23Q9ULK4 1368 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 B4E1Z4 1266 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 WBP4O75554 376 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 PFKFB1P16118 471 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 CA4P22748 312 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 SF3A3Q12874 501 aaKnown RBP eCLIP5.48□□□□□ -1.532e-6■□□□□ 11.1
SMG1-211ENST00000565324 TMEM259Q4ZIN3 620 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PPP4R3CPQ6ZMV5 832 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 NLRX1Q86UT6 975 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PHF21AQ96BD5 680 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 HMGXB3Q12766 1538 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 GPAA1O43292 621 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 OCM2P0CE71 109 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 OCMP0CE72 109 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 CIITAP33076 1130 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PSMC1P62191 440 aaKnown RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 TRADDQ15628 312 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 AKAP4Q5JQC9 854 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 CYP4F22Q6NT55 531 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 OSBPL9Q96SU4 736 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 USP40Q9NVE5 1235 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PCDHA12Q9UN75 941 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 EFTUD2Q15029 972 aaKnown RBP eCLIP5.48□□□□□ -1.532e-6■■■■□ 20.9
SMG1-211ENST00000565324 CYTH1Q15438 398 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 TCP11X2Q5H9J9 407 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 C1orf146Q5VVC0 180 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 FAM178BQ8IXR5 827 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 DNAAF3Q8N9W5 541 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 DSCC1Q9BVC3 393 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 PARVBQ9HBI1 364 aa5.48□□□□□ -1.53
SMG1-211ENST00000565324 V9GY48 417 aaPredicted RBP5.48□□□□□ -1.53
SMG1-211ENST00000565324 PSMA3P25788 255 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 HSPA13P48723 471 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 RASSF7Q02833 373 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 ZCRB1Q8TBF4 217 aaKnown RBP5.47□□□□□ -1.53
SMG1-211ENST00000565324 THAP11Q96EK4 314 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 PGBD1Q96JS3 809 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 KLC4Q9NSK0 619 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 TMEM63CQ9P1W3 806 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 RWDD2AQ9UIY3 292 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 PHF8Q9UPP1 1060 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 TLR3O15455 904 aaKnown RBP5.47□□□□□ -1.53
SMG1-211ENST00000565324 SCYL2Q6P3W7 929 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 CYTH2Q99418 400 aa5.47□□□□□ -1.53
SMG1-211ENST00000565324 ARPP21Q9UBL0 812 aaPredicted RBP5.47□□□□□ -1.53
SMG1-211ENST00000565324 SLC12A6Q9UHW9 1150 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms