RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 PPP1R12AO14974 1030 aaPredicted RBP6.3□□□□□ -1.4
PALB2-203ENST00000565038 RAPGEF3O95398 923 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 SRGAP2CP0DJJ0 459 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 GNAT1P11488 350 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 IGFBP6P24592 240 aaPredicted RBP6.3□□□□□ -1.4
PALB2-203ENST00000565038 PAK1Q13153 545 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 CILP2Q8IUL8 1156 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 RBM12BQ8IXT5 1001 aaKnown RBP6.3□□□□□ -1.4
PALB2-203ENST00000565038 ARRDC4Q8NCT1 418 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 NCOA5Q9HCD5 579 aaKnown RBP6.3□□□□□ -1.4
PALB2-203ENST00000565038 SFMBT1Q9UHJ3 866 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 FAN1Q9Y2M0 1017 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 PCDHB4Q9Y5E5 795 aa6.3□□□□□ -1.4
PALB2-203ENST00000565038 CCDC163A0A0D9SF12 145 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 KRIT1O00522 736 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 SLC27A2O14975 620 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 NKRFO15226 690 aaKnown RBP eCLIP6.29□□□□□ -1.4
PALB2-203ENST00000565038 NUAK1O60285 661 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 TADA3O75528 432 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 RASGRP1O95267 797 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 YBX3P16989 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
PALB2-203ENST00000565038 CFPP27918 469 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 STAT5AP42229 794 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 FOXO4P98177 505 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 CHRNA2Q15822 529 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 OTOP3Q7RTS5 596 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 AMIGO3Q86WK7 504 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 FAM26EQ8N5C1 309 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 PCDH19Q8TAB3 1148 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 SCLYQ96I15 445 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 SYT3Q9BQG1 590 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 RNF38Q9H0F5 515 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 SLC6A20Q9NP91 592 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
PALB2-203ENST00000565038 MRPL42Q9Y6G3 142 aaKnown RBP6.29□□□□□ -1.4
PALB2-203ENST00000565038 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 ASMTLO95671 621 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 CACNB2Q08289 660 aaPredicted RBP6.28□□□□□ -1.4
PALB2-203ENST00000565038 SPIRE1Q08AE8 756 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 TRIM61Q5EBN2 209 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 EMC4Q5J8M3 183 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 ETV3LQ6ZN32 361 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 BRAPQ7Z569 592 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 FGD2Q7Z6J4 655 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
PALB2-203ENST00000565038 LRRC56Q8IYG6 542 aaPredicted RBP6.28□□□□□ -1.4
PALB2-203ENST00000565038 GSTCDQ8NEC7 633 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 SMARCC2Q8TAQ2 1214 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
PALB2-203ENST00000565038 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 CLUHP3Q96NS8 147 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
PALB2-203ENST00000565038 SMOC1Q9H4F8 434 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 TMEM260Q9NX78 707 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
PALB2-203ENST00000565038 ARVCFO00192 962 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 RFXAPO00287 272 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 EFCAB14O75071 495 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 LTFP02788 710 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 C8BP07358 591 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 PYGMP11217 842 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 GRIN1Q05586 938 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 C21orf62-AS1Q17RA5 79 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 ZNF385BQ569K4 471 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 CIAPIN1Q6FI81 312 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 CD300LDQ6UXZ3 194 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 B3GNT8Q7Z7M8 397 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 MIB1Q86YT6 1006 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 CPA5Q8WXQ8 436 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 FBXW5Q969U6 566 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 PWWP2AQ96N64 755 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 TRIM39Q9HCM9 518 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 CATSPERZQ9NTU4 200 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 FANCLQ9NW38 375 aa6.27□□□□□ -1.41
PALB2-203ENST00000565038 PLD2O14939 933 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 MAFKO60675 156 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 IGSF3O75054 1194 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 NAT1P18440 290 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 DNM2P50570 870 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 VMACQ2NL98 169 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 HABP4Q5JVS0 413 aaKnown RBP6.26□□□□□ -1.41
PALB2-203ENST00000565038 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 FAM126BQ8IXS8 530 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
PALB2-203ENST00000565038 CLEC4DQ8WXI8 215 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 NOX5Q96PH1 765 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 CD244Q9BZW8 370 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 ASH2LQ9UBL3 628 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 DSEQ9UL01 958 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 COQ6Q9Y2Z9 468 aa6.26□□□□□ -1.41
PALB2-203ENST00000565038 TCRBV5S4A2TA0A5A2 114 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 KCNQ2O43526 872 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms