RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ECM1Q16610 540 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 KMT5BQ4FZB7 885 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 NCAPH2Q6IBW4 605 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 NSMFQ6X4W1 530 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 SLC30A10Q6XR72 485 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 HSD3B7Q9H2F3 369 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 GOLGA6L6A8MZA4 724 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 CD44P16070 742 aaKnown RBP21.91■■□□□ 1.1
CLN6-205ENST00000564846 MCM6Q14566 821 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 LDLRAD1Q5T700 205 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 LRCH2Q5VUJ6 765 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 CNNM4Q6P4Q7 775 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 GADL1Q6ZQY3 521 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 KCTD17Q8N5Z5 321 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 MB21D1Q8N884 522 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 TAAR1Q96RJ0 339 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 KIAA1024Q9UPX6 916 aa21.91■■□□□ 1.1
CLN6-205ENST00000564846 PSMD10O75832 226 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 RPA1P27694 616 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 ASIC1P78348 528 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 PPP2R5CQ13362 524 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 OTOP1Q7RTM1 612 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 SMYD4Q8IYR2 804 aaPredicted RBP21.9■■□□□ 1.1
CLN6-205ENST00000564846 ZNF577Q9BSK1 485 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 WDR11Q9BZH6 1224 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 ACAD9Q9H845 621 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 FANCLQ9NW38 375 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 NFE2L3Q9Y4A8 694 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 PTPRFP10586 1907 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 LOC285556D6RIA3 1793 aa21.9■■□□□ 1.1
CLN6-205ENST00000564846 BAATQ14032 418 aaPredicted RBP21.89■■□□□ 1.1
CLN6-205ENST00000564846 DHX8Q14562 1220 aaKnown RBP21.89■■□□□ 1.1
CLN6-205ENST00000564846 XRRA1Q6P2D8 792 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 LBX2Q6XYB7 198 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 KCNK18Q7Z418 384 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 CATSPER3Q86XQ3 398 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 OPTNQ96CV9 577 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 RMDN3Q96TC7 470 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 RIT2Q99578 217 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 PXMP2Q9NR77 195 aa21.89■■□□□ 1.1
CLN6-205ENST00000564846 PVALEFA0A1B0GWK0 134 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 MYMKA6NI61 221 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 MED24O75448 989 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 ARP10275 920 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 ITGB5P18084 799 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 PGM5Q15124 567 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 ARHGEF16Q5VV41 709 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 KLHL10Q6JEL2 608 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 GIMAP8Q8ND71 665 aaPredicted RBP21.89■■□□□ 1.09
CLN6-205ENST00000564846 MED15Q96RN5 788 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 POLR3CQ9BUI4 534 aaPredicted RBP21.89■■□□□ 1.09
CLN6-205ENST00000564846 EXOC1Q9NV70 894 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 AGTPBP1Q9UPW5 1226 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 UBIAD1Q9Y5Z9 338 aa21.89■■□□□ 1.09
CLN6-205ENST00000564846 SYNRGQ9UMZ2 1314 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 COL11A1P12107 1806 aaPredicted RBP21.88■■□□□ 1.09
CLN6-205ENST00000564846 GAS7O60861 476 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 TPM3P06753 285 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 IRX3P78415 501 aaPredicted RBP21.88■■□□□ 1.09
CLN6-205ENST00000564846 PLS1Q14651 629 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 SPATA1Q5VX52 437 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 MAP1SQ66K74 1059 aaPredicted RBP21.88■■□□□ 1.09
CLN6-205ENST00000564846 FASTKD5Q7L8L6 764 aaKnown RBP21.88■■□□□ 1.09
CLN6-205ENST00000564846 DRC7Q8IY82 874 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
CLN6-205ENST00000564846 CHST13Q8NET6 341 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 IL31RAQ8NI17 732 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 PDCD2LQ9BRP1 358 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 JADE2Q9NQC1 790 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 RWDD2AQ9UIY3 292 aa21.88■■□□□ 1.09
CLN6-205ENST00000564846 IPO5O00410 1097 aaKnown RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 POTEIP0CG38 1075 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 POTEJP0CG39 1038 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 SPATA31C1P0DKV0 1188 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 EIF2AK2P19525 551 aaKnown RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 PPP1R2P41236 205 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 FANCCQ00597 558 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 PDE4DQ08499 809 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 STIM1Q13586 685 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 UNC13DQ70J99 1090 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 TEKT3Q9BXF9 490 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 BMP2KQ9NSY1 1161 aaPredicted RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 GDAQ9Y2T3 454 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 PLA2G4BP0C869 781 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 ZNF18P17022 549 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 MRPS9P82933 396 aaKnown RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 PAK1Q13153 545 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 PABPC4Q13310 644 aaKnown RBP eCLIP21.87■■□□□ 1.09
CLN6-205ENST00000564846 ADSSL1Q8N142 457 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 ZFP91Q96JP5 570 aaPredicted RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 EIF2AK1Q9BQI3 630 aaKnown RBP21.87■■□□□ 1.09
CLN6-205ENST00000564846 TUFT1Q9NNX1 390 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 KCNH7Q9NS40 1196 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 CYP39A1Q9NYL5 469 aa21.87■■□□□ 1.09
CLN6-205ENST00000564846 POTEFA5A3E0 1075 aa21.86■■□□□ 1.09
CLN6-205ENST00000564846 E9PMD0 336 aa21.86■■□□□ 1.09
CLN6-205ENST00000564846 ATP1A3P13637 1013 aa21.86■■□□□ 1.09
CLN6-205ENST00000564846 PRCPP42785 496 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms