RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MAN2A1Q16706 1144 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CNNM4Q6P4Q7 775 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 PDXDC1Q6P996 788 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DDX20Q9UHI6 824 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 GCOM1H8Y6P7 765 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MYZAPP0CAP1 466 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 HGSNATQ68CP4 663 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 SV2BQ7L1I2 683 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ZNF34Q8IZ26 560 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 UHMK1Q8TAS1 419 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MMTAG2Q9BU76 263 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CNOT8Q9UFF9 292 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FAM83BQ5T0W9 1011 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FGFBP2Q9BYJ0 223 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CELF4Q9BZC1 486 aaKnown RBP22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 OSBPL7Q9BZF2 842 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 SMCO2A6NFE2 343 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ACTN1P12814 892 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 PRLRP16471 622 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CAVIN4Q5BKX8 364 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 USP17L2Q6R6M4 530 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 KCNK18Q7Z418 384 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TBCKQ8TEA7 893 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CALML4Q96GE6 196 aa22.55■■□□□ 1.2
MAP1LC3B-206ENST00000564844 A0A1W2PQJ5 194 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 PPP1R12BO60237 982 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 COPB2P35606 906 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 SLC9C1Q4G0N8 1177 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 SFMBT2Q5VUG0 894 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TMED8Q6PL24 325 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FAM107AO95990 144 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ITGA4P13612 1032 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TAF4BQ92750 862 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 BRIP1Q9BX63 1249 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 VCPKMTQ9H867 229 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 AMACRQ9UHK6 382 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 RAD21O60216 631 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FAM84BQ96KN1 310 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 GGT7Q9UJ14 662 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ODF2LQ9ULJ1 636 aa22.54■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TLDC2A0PJX2 215 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CDK17Q00537 523 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CENPPQ6IPU0 288 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CCDC84Q86UT8 332 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CRNKL1Q9BZJ0 848 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FBXL5Q9UKA1 691 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CHUKO15111 745 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DAPK3O43293 454 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MYCNP04198 464 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MAGOHP61326 146 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 KLHL30Q0D2K2 578 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 UAP1Q16222 522 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CPLX4Q7Z7G2 160 aa22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MAGOHBQ96A72 148 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 GPR101Q96P66 508 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-206ENST00000564844 HGSO14964 777 aaPredicted RBP22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TSPY3P0CV98 308 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TSPY8P0CW00 308 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 NF2P35240 595 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 BANK1Q8NDB2 785 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 NSUN4Q96CB9 384 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DISP2A7MBM2 1401 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 GMNCA6NCL1 334 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 KLRF2D3W0D1 207 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 STXBP3O00186 592 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CDC37Q16543 378 aaPredicted RBP22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 C7orf25Q9BPX7 421 aa22.52■■□□□ 1.2
MAP1LC3B-206ENST00000564844 LMTK3Q96Q04 1460 aa22.52■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NPHP3-ACAD11A0A0J9YXS1 232 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 AMPD3Q01432 767 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ITIH3Q06033 890 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DDX12PQ92771 950 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CARD10Q9BWT7 1032 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 BLOC1S4Q9NUP1 217 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 COL1A1P02452 1464 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 GRID2IPA4D2P6 1211 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SKAP2O75563 359 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TDP2O95551 362 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PRPF4BQ13523 1007 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ASTE1Q2TB18 679 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 KRT71Q3SY84 523 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 FIGNQ5HY92 759 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TMBIM4Q9HC24 238 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 LEMD3Q9Y2U8 911 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 HNRNPH3P31942 346 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 GRB10Q13322 594 aa22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ZNF572Q7Z3I7 529 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ZNF844Q08AG5 666 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 RPS6KA1Q15418 735 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CYB5D1Q6P9G0 228 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 USP38Q8NB14 1042 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TAF1DQ9H5J8 278 aaPredicted RBP22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 BAIAP2L1Q9UHR4 511 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NOL4O94818 638 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NONOQ15233 471 aaKnown RBP eCLIP22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MARCH10Q8NA82 808 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms