RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CDK7P50613 346 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 LAMC2Q13753 1193 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 CELF3Q5SZQ8 465 aaKnown RBP19.8■□□□□ 0.76
USB1-209ENST00000564387 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 GALNT17Q6IS24 598 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 REXO1Q8N1G1 1221 aaKnown RBP19.8■□□□□ 0.76
USB1-209ENST00000564387 DAGLBQ8NCG7 672 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 ZFP91Q96JP5 570 aaPredicted RBP19.8■□□□□ 0.76
USB1-209ENST00000564387 GLT1D1Q96MS3 346 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 AIFM3Q96NN9 605 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 SENP7Q9BQF6 1050 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 RTEL1Q9NZ71 1219 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 NR2E3Q9Y5X4 410 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 KPNA6O60684 536 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 UBA1P22314 1058 aaKnown RBP19.79■□□□□ 0.76
USB1-209ENST00000564387 ATN1P54259 1190 aaPredicted RBP19.79■□□□□ 0.76
USB1-209ENST00000564387 PURAQ00577 322 aaKnown RBP19.79■□□□□ 0.76
USB1-209ENST00000564387 ANKRD33Q7Z3H0 272 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 SEZ6LQ9BYH1 1024 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 JADE2Q9NQC1 790 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 STARD7Q9NQZ5 370 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 SH2B1Q9NRF2 756 aaPredicted RBP19.79■□□□□ 0.76
USB1-209ENST00000564387 POLR3EQ9NVU0 708 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 PCDHA4Q9UN74 947 aa19.79■□□□□ 0.76
USB1-209ENST00000564387 GRIN2DO15399 1336 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 RTP1P59025 263 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 BRDTQ58F21 947 aaPredicted RBP19.78■□□□□ 0.76
USB1-209ENST00000564387 PRPF38BQ5VTL8 546 aaKnown RBP19.78■□□□□ 0.76
USB1-209ENST00000564387 JAKMIP3Q5VZ66 844 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 CXCL17Q6UXB2 119 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 NLRX1Q86UT6 975 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 PPTC7Q8NI37 304 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 AFG1LQ8WV93 481 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 CDHR1Q96JP9 859 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 PGBD1Q96JS3 809 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 TOX2Q96NM4 488 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 MXRA8Q9BRK3 442 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 LLPHQ9BRT6 129 aaKnown RBP19.78■□□□□ 0.76
USB1-209ENST00000564387 PHF20Q9BVI0 1012 aa19.78■□□□□ 0.76
USB1-209ENST00000564387 ORC3Q9UBD5 711 aaPredicted RBP19.78■□□□□ 0.76
USB1-209ENST00000564387 MEIS1O00470 390 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 EDIL3O43854 480 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 MMP3P08254 477 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 NLRP5P59047 1200 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 ARHGAP4P98171 946 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 NEDD9Q14511 834 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 NIPA1Q7RTP0 329 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 DHX37Q8IY37 1157 aaKnown RBP19.77■□□□□ 0.76
USB1-209ENST00000564387 WASF1Q92558 559 aa19.77■□□□□ 0.76
USB1-209ENST00000564387 SCN10AQ9Y5Y9 1956 aa19.77■□□□□ 0.75
USB1-209ENST00000564387 A0A0U1RQG5 324 aaPredicted RBP19.76■□□□□ 0.75
USB1-209ENST00000564387 H0YGN5 161 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 ARVCFO00192 962 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 ST18O60284 1047 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 PPFIA4O75335 1185 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 GGPS1O95749 300 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 KCNA2P16389 499 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 CIITAP33076 1130 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 TRIM60Q495X7 471 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 CEP55Q53EZ4 464 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 METTL7BQ6UX53 244 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 BLIDQ8IZY5 108 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 BCAS3Q9H6U6 928 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 MYH7BA7E2Y1 1941 aa19.76■□□□□ 0.75
USB1-209ENST00000564387 CEP290O15078 2479 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 IGLV3-22A0A075B6J6 115 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 JAK2O60674 1132 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 DTNBO60941 627 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 ATP9AO75110 1047 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 TLE2Q04725 743 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 MTMR1Q13613 665 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 ITGA7Q13683 1181 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 HSDL1Q3SXM5 330 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 C7orf61Q8IZ16 206 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 GIMAP8Q8ND71 665 aaPredicted RBP19.75■□□□□ 0.75
USB1-209ENST00000564387 CYP2W1Q8TAV3 490 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 RASGRP4Q8TDF6 673 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 MTG1Q9BT17 334 aaPredicted RBP19.75■□□□□ 0.75
USB1-209ENST00000564387 KCNH7Q9NS40 1196 aa19.75■□□□□ 0.75
USB1-209ENST00000564387 FAM86B1E9PN63 330 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 CD2BP2O95400 341 aaKnown RBP19.74■□□□□ 0.75
USB1-209ENST00000564387 FAM86B2P0C5J1 330 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 XBP1P17861 261 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 MCM2P49736 904 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 DGKDQ16760 1214 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 KAT2BQ92831 832 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 ALG1Q9BT22 464 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 GJB4Q9NTQ9 266 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 KCNJ14Q9UNX9 436 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 MROH7Q68CQ1 1323 aa19.74■□□□□ 0.75
USB1-209ENST00000564387 MYL3P08590 195 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 USP11P51784 963 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 CCDC83Q8IWF9 413 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 FAM126BQ8IXS8 530 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 SPATA33Q96N06 139 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 MLXIPQ9HAP2 919 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 ATP11BQ9Y2G3 1177 aa19.73■□□□□ 0.75
USB1-209ENST00000564387 HAS3O00219 553 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 F2P00734 622 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 CD4P01730 458 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms