RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 POTEBQ6S5H4 581 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 SPICE1Q8N0Z3 855 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 GPR161Q8N6U8 529 aaKnown RBP18.4■□□□□ 0.54
CCNF-204ENST00000564333 OR8K1Q8NGG5 319 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 ETNPPLQ8TBG4 499 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 FAM151AQ8WW52 585 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCNF-204ENST00000564333 DNAJC19Q96DA6 116 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 GMLQ99445 158 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 TTYH3Q9C0H2 523 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
CCNF-204ENST00000564333 ZNF277Q9NRM2 450 aaPredicted RBP18.4■□□□□ 0.54
CCNF-204ENST00000564333 MRFAP1Q9Y605 127 aa18.4■□□□□ 0.54
CCNF-204ENST00000564333 FOSP01100 380 aaPredicted RBP18.39■□□□□ 0.53
CCNF-204ENST00000564333 SSBP05455 408 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCNF-204ENST00000564333 ECE1P42892 770 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 Q4G0T1 1027 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 HAUS3Q68CZ6 603 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 NUP58Q9BVL2 599 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 CARD6Q9BX69 1037 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 IRX2Q9BZI1 471 aaPredicted RBP18.39■□□□□ 0.53
CCNF-204ENST00000564333 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 KIAA1024Q9UPX6 916 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 E9PMD0 336 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.53
CCNF-204ENST00000564333 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.53
CCNF-204ENST00000564333 STAT3P40763 770 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 STAT2P52630 851 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 PRR16Q569H4 304 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 TSG101Q99816 390 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 ZBTB21Q9ULJ3 1066 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
CCNF-204ENST00000564333 ABCB11O95342 1321 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 OPLAHO14841 1288 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 TBX3O15119 743 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 ZRANB2O95218 330 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCNF-204ENST00000564333 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 PNMA6AP0CW24 399 aaPredicted RBP18.38■□□□□ 0.53
CCNF-204ENST00000564333 KLK7P49862 253 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 TSR1Q2NL82 804 aaKnown RBP18.38■□□□□ 0.53
CCNF-204ENST00000564333 TEX35Q5T0J7 233 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 PCMTD1Q96MG8 357 aaPredicted RBP18.38■□□□□ 0.53
CCNF-204ENST00000564333 ERGIC2Q96RQ1 377 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 CHP1Q99653 195 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 SLF1Q9BQI6 1058 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 GOPCQ9HD26 462 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
CCNF-204ENST00000564333 PANK4Q9NVE7 773 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 ATAD5Q96QE3 1844 aa18.38■□□□□ 0.53
CCNF-204ENST00000564333 MED24O75448 989 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 SPIRE1Q08AE8 756 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 LRRC41Q15345 812 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 FOXR2Q6PJQ5 311 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 GLIS3Q8NEA6 775 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 LENG9Q96B70 501 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 TMX2Q9Y320 296 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
CCNF-204ENST00000564333 NKRFO15226 690 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCNF-204ENST00000564333 NDUFA10O95299 355 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 DPEP1P16444 411 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 PPP2R3AQ06190 1150 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 MAN2A1Q16706 1144 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 KIAA1755Q5JYT7 1200 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 CCDC65Q8IXS2 484 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 ERMNQ8TAM6 284 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 RABGGTAQ92696 567 aa18.37■□□□□ 0.53
CCNF-204ENST00000564333 RBBP6Q7Z6E9 1792 aaKnown RBP18.36■□□□□ 0.53
CCNF-204ENST00000564333 POTEFA5A3E0 1075 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 RASSF10A6NK89 507 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 POTEIP0CG38 1075 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
CCNF-204ENST00000564333 BAG6P46379 1132 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 MEA1Q16626 185 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 FIGNQ5HY92 759 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 ZNF569Q5MCW4 686 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 FAM83BQ5T0W9 1011 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 NCAPH2Q6IBW4 605 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
CCNF-204ENST00000564333 EPN1Q9Y6I3 576 aaPredicted RBP18.36■□□□□ 0.53
CCNF-204ENST00000564333 A0A1W2PQJ5 194 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 PIK3CDO00329 1044 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 CYP11B2P19099 503 aa18.35■□□□□ 0.53
CCNF-204ENST00000564333 CIITAP33076 1130 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms