RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 NUGGCQ68CJ6 796 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 BICD1Q96G01 975 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 FAM167BQ9BTA0 163 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 TBK1Q9UHD2 729 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 RAB21Q9UL25 225 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 CDHR2Q9BYE9 1310 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 KRT5P13647 590 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 DNAJC17Q9NVM6 304 aaKnown RBP13.77□□□□□ -0.21
COMMD4-209ENST00000564068 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 SNX24Q9Y343 169 aa13.77□□□□□ -0.21
COMMD4-209ENST00000564068 FGGP02679 453 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 RBBP5Q15291 538 aaKnown RBP13.76□□□□□ -0.21
COMMD4-209ENST00000564068 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 GDAP1Q8TB36 358 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 SPDL1Q96EA4 605 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 PPP2R2AP63151 447 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 MESDQ14696 234 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 CCDC13Q8IYE1 715 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-209ENST00000564068 GEMIN8Q9NWZ8 242 aaKnown RBP13.76□□□□□ -0.21
COMMD4-209ENST00000564068 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 ADGRB2O60241 1585 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 GSG1L2A8MUP6 293 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 TULP2O00295 520 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 ANKRD40Q6AI12 368 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
COMMD4-209ENST00000564068 THAP12O43422 761 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 EYA3Q99504 573 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 RASGRF2O14827 1237 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 GFPT2O94808 682 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ZNF18P17022 549 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ADCY8P40145 1251 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 CYP4A11Q02928 519 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 CUL1Q13616 776 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ANKRD20A3Q5VUR7 823 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 KRT27Q7Z3Y8 459 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 IL17RAQ96F46 866 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 MAP3K14Q99558 947 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 KCND1Q9NSA2 647 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 TCHHQ07283 1943 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 GAS8O95995 478 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 MYL1P05976 194 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 PPP2R5EQ16537 467 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 KIRREL3Q8IZU9 778 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 PBKQ96KB5 322 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 AK8Q96MA6 479 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 PSMD1Q99460 953 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ZMYND12Q9H0C1 365 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 VPS37BQ9H9H4 285 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 INTS13Q9NVM9 706 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 NOP53Q9NZM5 478 aaKnown RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 DAPK3O43293 454 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 RAB3IPQ96QF0 476 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-209ENST00000564068 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 CPDO75976 1380 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 JCADQ9P266 1359 aa13.75□□□□□ -0.21
COMMD4-209ENST00000564068 MAP3K15Q6ZN16 1313 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-209ENST00000564068 BIRC3Q13489 604 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 DDX42Q86XP3 938 aaKnown RBP eCLIP13.74□□□□□ -0.21
COMMD4-209ENST00000564068 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 H0Y3Z8 333 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 RASSF2P50749 326 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 NBPF9Q3BBW0 867 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms