RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 CDKAL1Q5VV42 579 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 POMZP3Q6PJE2 187 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 ZNF227Q86WZ6 799 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 ARHGEF39Q8N4T4 335 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 JMYQ8N9B5 988 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 SYTL5Q8TDW5 730 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 APPBP2Q92624 585 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 SIN3AQ96ST3 1273 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 SPOCK3Q9BQ16 436 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 CHST7Q9NS84 486 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 PRR13Q9NZ81 148 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 PTCH2Q9Y6C5 1203 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 MAP3K19Q56UN5 1328 aa7.99□□□□□ -1.13
HERPUD1-208ENST00000563911 ADCY3O60266 1144 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 PRAMEF1O95521 474 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 HOXC9P31274 260 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 OXCT1P55809 520 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 NKAPLQ5M9Q1 402 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 ZSWIM2Q8NEG5 633 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 IPO9Q96P70 1041 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 CDC6Q99741 560 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 TMEM260Q9NX78 707 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 CGGBP1Q9UFW8 167 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 MINPP1Q9UNW1 487 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 SF3B6Q9Y3B4 125 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 EMC9Q9Y3B6 208 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 KIAA1551Q9HCM1 1747 aa7.98□□□□□ -1.13
HERPUD1-208ENST00000563911 TRAV20A0A0B4J274 112 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 SHISA3A0PJX4 238 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 CYP27B1O15528 508 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 CYP26A1O43174 497 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 TOMM70O94826 608 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 KCNH1O95259 989 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 PROCP04070 461 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 LONRF2Q1L5Z9 754 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 RSPO4Q2I0M5 234 aaPredicted RBP7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 LINC00116Q8NCU8 138 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 ENOX1Q8TC92 643 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 AARSD1Q9BTE6 412 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 MKNK2Q9HBH9 465 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 ARHGEF4Q9NR80 690 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 GPATCH2Q9NW75 528 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 U3KQE9 123 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 A0A1W2PP64 1363 aa7.97□□□□□ -1.13
HERPUD1-208ENST00000563911 C5P01031 1676 aa7.96□□□□□ -1.13
HERPUD1-208ENST00000563911 A0A0G2JLW4 131 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 TBX1O43435 398 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 KCNA3P22001 575 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 ITPK1Q13572 414 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 ZC3H12BQ5HYM0 836 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 TRIM59Q8IWR1 403 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 MRGPRX3Q96LB0 322 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 GPR62Q9BZJ7 368 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 DUSP15Q9H1R2 295 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 TRIT1Q9H3H1 467 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 PALLDQ8WX93 1383 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 USP47Q96K76 1375 aa7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 CICQ96RK0 1608 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-208ENST00000563911 PXDNLA1KZ92 1463 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 VAMP4O75379 141 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 CEACAM5P06731 702 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 L1CAMP32004 1257 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 GRIA2P42262 883 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 RRS1Q15050 365 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 NKPD1Q17RQ9 610 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 TMEM67Q5HYA8 995 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 FOXB2Q5VYV0 432 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 CWF19L1Q69YN2 538 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 ZNF662Q6ZS27 426 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 DAGLBQ8NCG7 672 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 BTN2A2Q8WVV5 523 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 PIGBQ92521 554 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 HSPA12BQ96MM6 686 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 ZSWIM5Q9P217 1185 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 ST14Q9Y5Y6 855 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 C4BP0C0L5 1744 aa7.95□□□□□ -1.14
HERPUD1-208ENST00000563911 UBR3Q6ZT12 1888 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 H0Y8X5 98 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 H3BS24 57 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 PRODHO43272 600 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 DYRK3O43781 588 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 ASMTLO95671 621 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 AMPD2Q01433 879 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 DPY19L1Q2PZI1 675 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 PLEKHG4Q58EX7 1191 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 FAM209AQ5JX71 171 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 YOD1Q5VVQ6 348 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 GTF2IRD2BQ6EKJ0 949 aa7.94□□□□□ -1.14
HERPUD1-208ENST00000563911 GTF2IRD2Q86UP8 949 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms